Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03555 ATGATGTATCATAGAGCCAACGCGATTAATCGGAATCTATTGTTCTTTCGTTATCATAATGAAAACGTTCTTTTCCACACAAATTCACATCAACCTCAAGGGTCAACTTCAAAGTTTCGCCATCGCAAACACATTCCTTTCATCACCGAAATCAAACATGTTGAAAACTCAGAACAAGCTTTGTCTCTTTTTCACCATTACAACCAACTCGGTTACAAACACTATTACCCTTCCTACGCCGCATTGCTTTACAAACTCGCTCGTTCTAGAAACTTTCATGCCGTCGAAACCATACTCACTCAAATCAAACAAACCAACATGCATTGTAAAGAAACCCTTTTCATCGCTCTCTTTCAACATTACGGTCCCTTAAAAGCCATTCATCTATTTCAAACAATGCCGCAATACAATTGCGTTCGAACTTTGCAGTCGTTAAATGCGCTTCTCAATCTTCTCGTTGACCATCGTATGTTTTCCGAAGCAAACGACGCTTTCGCTCGTTCCTATGAAATGGGTTTTCGTCCAAATACTGTCACGTTCAATATAATGATCAAAGGGTGGTTGGCGAAAGGTGAGTGGGGAAGAGTGTGTGAAGTGTTTGATGAAATGCTTCTGAATAGAGTACAGTGA 630 0.4016 MMYHRANAINRNLLFFRYHNENVLFHTNSHQPQGSTSKFRHRKHIPFITEIKHVENSEQALSLFHHYNQLGYKHYYPSYAALLYKLARSRNFHAVETILTQIKQTNMHCKETLFIALFQHYGPLKAIHLFQTMPQYNCVRTLQSLNALLNLLVDHRMFSEANDAFARSYEMGFRPNTVTFNIMIKGWLAKGEWGRVCEVFDEMLLNRVQ 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03555 209 Gene3D Tetratricopeptide repeat domain 20 206 IPR011990 GO:0005515
Car06g03555 209 Pfam PPR repeat 178 206 IPR002885 -
Car06g03555 209 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 25 205 - -
Car06g03555 209 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 176 209 IPR002885 -
Car06g03555 209 TIGRFAM PPR: pentatricopeptide repeat domain 178 206 IPR002885 -
Car06g03555 209 PANTHER OS05G0548600 PROTEIN 25 205 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03555 - - gmx:100776556 268.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03555 06 66773727 66774356 Car06g03555 06 66773727 66774356 ECH