Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03552 ATGAAACGAATGGACATGTTCTGTTCTTCCCCTGCTTCAACAGAAGTAATACATCAAAGTTCTATTATGCTTCGACGAAGCAGAAGCACCAAAAGCTACTACGAACATGAAAGAAGGAAAAACCAACTTCATCGTGCTCCTTGTTCATCTCAATTATTACTACCTATTAATCCTAAGCCTTACTTTGAGAAACACCGAAAGAGTTCAGCAGATAAACAAGTAAACAATGACACACGTAGAAAAAGTTCTGTTCATGTTAAAGATTTGTCTTCTAATTATCCAAGTGTTGCTGATTCTTCTAGAAGATATCTCCTTGATGATAAACCATTCATCGATTGGGTTTCTGAGTCCAACAAAATGGTTTCTAAGCTTGATGATAAAACCATGTCCATGGATATGAAAAGAAAGGATTCTCATGCTCTTGTTAAGTTCTCTTCTTCACCTCTCTCCTCCAAGGACCAGGTTGTGGTTCTAAGGGTGTCATTGCACTGCAGAGCCTGCGAAGGAAAAGTCAGAAAACATATCTCAAAAATGGAAGGAGTGACATCATTCAGCATAGAAATGGAGACAAAGAAAGTAACCATTGTAGGAAACGTGACGCCATCAAGTGTACTGGAGAGTGTATCCAAGGTGAAGAGTGCACAGCTATGGTCTTCTCCAACATTATCATCATCTTATTTCACATAA 687 0.3857 MKRMDMFCSSPASTEVIHQSSIMLRRSRSTKSYYEHERRKNQLHRAPCSSQLLLPINPKPYFEKHRKSSADKQVNNDTRRKSSVHVKDLSSNYPSVADSSRRYLLDDKPFIDWVSESNKMVSKLDDKTMSMDMKRKDSHALVKFSSSPLSSKDQVVVLRVSLHCRACEGKVRKHISKMEGVTSFSIEMETKKVTIVGNVTPSSVLESVSKVKSAQLWSSPTLSSSYFT 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03552 228 ProSiteProfiles Heavy-metal-associated domain profile. 154 211 IPR006121 GO:0046872
Car06g03552 228 Pfam Heavy-metal-associated domain 158 210 IPR006121 GO:0046872
Car06g03552 228 PANTHER HEAVY METAL-ASSOCIATED DOMAIN CONTAINING PROTEIN, EXPRESSED 1 225 - -
Car06g03552 228 MobiDBLite consensus disorder prediction 62 90 - -
Car06g03552 228 MobiDBLite consensus disorder prediction 62 86 - -
Car06g03552 228 SUPERFAMILY HMA, heavy metal-associated domain 154 211 IPR036163 GO:0046872
Car06g03552 228 CDD HMA 157 210 IPR006121 GO:0046872
Car06g03552 228 PANTHER OS08G0405700 PROTEIN 1 225 IPR044526 -
Car06g03552 228 Gene3D - 150 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03552 Car-Chr6 66765691 66767389 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03552 - - gmx:100807544 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03552 06 66765691 66767389 Car06g03552 06 66765691 66767389 ECH