Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03544 ATGGAAACAGAAACAGAAGCTATGCAGCCTCAAGCTGCACCAGCAAAACCCCTAAGGAAGAAAATGACGAAACAGTTGACAGGGAAACGCGACGATACACCTTTACATTCAGCAGCAAGAGCAGGAAACATGGCTTCATTGAAGGACACAGTTGCTGGTGCTGAAGAGGGTAAACTGCATGAATTGTTTGCAAAGCAGAACCAAGGTGGAGAAACAGCACTTTATGTTGCTGCTGAGTATGGTTATGTTGATTTTGTTAGGGAGATGATTCAGTATTATGATCTTTCTGATGCTGGAATTAAAGCTAGGAATGGTTTTGATGCACTTCATATTGCTGCTAAACAAGGGGATTTAGATATACTAAAGATCCTAATGGAAGCTCATCCAGAATTATCAATGACAGTGGATCCATCCAACACCACAGCCTTACACACAGCTGCAACACAAGGACACACTGAGATAGTCAAATTTCTATTAGAAGCAGGTAGTAGCTTAGCAACAATAGCTAGAAGCAATGGTAAAACAGCTTTGCATTCTGCTGCAAGAAACGGACATTTGGATGTCGTGAAAGCGATTCTCGAGAAGGAACCCGGGGTTGTTACAAGAACCGATAAAAAGGGACAAACAGCGCTTCACATGGCAGTGAAGGGACAGAATCTCGAGGTGGTAGAGGAATTGATAAAAGCAGATCCTTCATCAATCAATATGGTTGATAATAAGGGTAATACTGCATTGCATATAGCTACCAGAAAGGGAAGAATTCAGATAATTAAGTTGCTACTAGGACAGAATGAAACAAATGGTATGGCAATAAACAAAAGTGGTGAAACAGCATTAGACACAGCAGAGAAAACAGGAAACAGTCAAGTAAAAGAAATTCTAATAGAACATGGTATTCAAATTGGAAAATCAATAAAATCTCAACCAACAACAACAACAGCCAGAGAGCTAAAACAAACAGTAAGTGACATAAAACATGAAGTCCATCACCAACTAGAACACACTCGCCAAACGCGAAAAAGCGTCCAAGGAATAGCAAAACGCCTCAACAAAATGCACACAGAAGGACTCAACAATGCAATAAACTCAACAATAGTCGTTGCAGTACTAATTGCAACGGTGGCATTCGCCGCTATATTCACTGTCCCCGGTCAATTTGTGGACGATCCAAAACACATTCCTGCAGGAAAGTCGCTGGGGGAAGCCAACATTGCTCCGAAGGCAGCGTTTCTAATCTTCTTCGTGTTTGATTCGGTTGCGCTATTCATTTCGTTAGCAGTGGTGGTGGTGCAAACTTCAATTGTTGTCATTGAAAGTAAAGCAAAGAAGCAAATGATGGCTATAATTAACAAACTAATGTGGTTGGCTTGTGTGTTAATTTCAGTGTCGTTTTTGGCATTGTCGTTTTTGGTTGTGGGAAAAGATGAAAGGTGGCTTGCAATTTCGGTAACAATCATTGGGACTATTATAATGGCTACTACATTGGGTACTATGTGTTACTGGGTTATTAGGCATAGAATTGAGGCTTCTAATTTGAGGAGTATACGTAAATCTTCATTGGGAAGTAGGTCAAGGTCATTTTCGGTATCAGTTATGTCTGATTCTGAGATATTGAATAATGACCGTAGGAAAATATGTTTTGAGAACCAGAATTTTCTTCTTCCTTCCTTTATTTTTTTCTCCATAGTCGACAAGAAGAGACAAAATGACAAAAGACAGCTGTCCAAGTATATTGTCATTGACACATGTCGTAGTCACGGAGAAACTGAAGAACAACATTTCATTTTCAGGGATCAAAACACGCAACATTTCATTTTGCTTCCCCGAAAGATCAAAAGTGAAACGCATTGCAAATTTCCTAGCGTTCGTGAAGATCGAAACATGGACGACGAATTGCTCGAGTTACAGAGACAGTTCGAGTTCGCTCAGCAAGCGAAATCGAGTATTCGATTATCGGATCGCAACGTCGTCGAATTAGTCCAAAAATTGCAGCAACTTCAAATTATCGATTTCGAGCTTCTTCACACTGCCTCTGGAAAAGAATACATCACTCTCGATCAACTGAGAAATGAGATGGTTGCTGAGGTGAAGAAATTAGGCCGTATTTCTGTGATTGATCTTGCTGATGTCACTGGAGTTGACTTGTATTATGTTGAGAAACTGGCTCATAACATTGTAACGGATCACCGAGAATTGATGTTGACTCAAGGGGAAATCATTACGGAATCTTATTGGGATTCAACTGCTGAAGAGATTAACGAGAGGCTTCAAGAGTGTAGTCAAATTGCACTGACGGAACTCGCCGCACAATTGAATGTTGGTTTGGATTTGATTGCTTCTGTGTTGGAGCCGCGCCTTGGAACTATAGTGAAAGGAAGGCTTGAAGGAGGGCAGTTGTATACTCCTGCTTATGTTGCTCGTGTTAGTGCAATGGTTCGAGGTGCTGCGAGGGGCATCACAGTTCCGATGAATTTGACAGTGTTATGGAGCTCATTGCAGAACTTACTGCAGGAAATGGATGGAGCCAGTGGTGTGGCTGTTGATGGATCTTTCTTTCAGTCTTTGTTTAATGGACTTGTGAAGGGAGGCGAGATTTTAGGGTCGGTTCGTGCTGGGGTGCATTGGACACCAGCTGTATTTGCTGTTGCTCAAAAGGAATCCGTGGATTCTTTCTTTTCGCAAAATTCTTTTATCAACTATGATGTTCTGCACAAACTTGGAATTCCCCAGCCCATTCAGTTCTTGCAGTCCAGATATCCTGAAGGCAAACCTCTTGTTACAACATTTGTTCATCCATCGATGATTGAGATGCTAGATGCTGCTACTGAGGATGCTCTAGAACGCGGTAGCTGGAGTGATTCTCTTTCCTTATTGCCCTCATCTTTTACACCTCAAGATGCATCAAAAATGCTTTTCCTCTGTCAATCTGTACAATTGGCTCTGAAGTCTAACAAAGCACACATATTTGGGGATTTTTATGTGTTGAGCAGCAGCTTTATGAAGGATATTTGTGATCGCCTTGTGAAAGAATTAGAGACATTAGCTGTTTCAAGGTCTTTGGGCACTGCAAAATCTGGTGATTTACAAAAAGCCAGTGAAGTAAATGTAGGGTATGATTCAAGCAGGTTGAGTGAGTCGAATGAAACGGCGAGTGATGGGGGTTCCAACAAGCATGCTGATAAAGGGACTAAGAAGAAAAGGGGGAAAGCCGCTGGAAATGCATTAGCAAATCAATCTGAAAGTGCTCCTGATAACCAAGAACAGATTTCCACAAAATCTAAGAAAAGCCAGAGAAGGGGTAAGGATACATCTTCACAAACATCAGATTCCAAGCCAGGTTCTAGGAAAGAATCACATAAAATGAAAGAGGATGATCTCAGTAGTCCCTCAGAAGAGTGGATCATGAAGAAGATTACTGCCTTGATACCTGATTTTGAAGAACAAGGTATCGATGATCCTGAGACGATTCTTAGGCCTTTGGCTAACCAATTAAGGCCTACAATAATTAATACTTGGATGGAGAAAAAGAAGGCATTGCTTAAAGACAATGCAGAAAGAATGAAACATTTGCTCGATAATTTGCAGAAGAAACTTGATGAGTCTTTCTTAAACATGCAGCTGTATGAAAAAGCCTTAGAACTGTTTGAAGATGATCAATCAACTTCTGTTGTTTTGCATAGGCATTTACTTAGGACGGTAGCAGCTCCTATGGTTGATATGCTTCTTCATGACTTGGACGAGCACAACAAATTAAAGAACGGAGTTGACGTGCTGGAATCTTCAAATTCTGAGCCTATTTCATTAAGTTCTGGAGACAGAGCTGCAATTGCCAAGAGTTTTCCAGGAGCTCTTGCAAATAAGGCTCTTGCTGTTGTAGAAGCATTGGAAGGAAAGAGGGTGGAAACATTCATGACTGCATTCAGAATTGTGACGGAAGAGAGTGGGTTGCCTTTGAAAAAGCTTGACAAGAAACTAGAAAGAACACTTCTACATTCATATCGTAAGGAATTGACATCTGAAGTGTCGGCTGAGACTGACCCTGTATCACTTCTGCCAAAAGTTGTGTCTTTACTCTATGTCCAGGCTCACCATAAAGCTCTTCAAGCCCCTGGAAGGGCCATTTCTGTTGCTATTTCTCAATTGAAGGATAAGCTAGACGAGTCAGCATGCAAGATTTTAGCTGATTATCAAACTGCTACTGTGACTCTTTTGGCCCTATTATCAGCTGCTCCTGATGATAAAGAGAGTTGTGCATCTGATAGAATTCTGAGTAAAAGAGAGCTTCTGGAGAGCCAAATGCCAATCCTCAAAAGCTTGGTTTTGAGCTCCTCACAGTCATAA 4341 0.4117 METETEAMQPQAAPAKPLRKKMTKQLTGKRDDTPLHSAARAGNMASLKDTVAGAEEGKLHELFAKQNQGGETALYVAAEYGYVDFVREMIQYYDLSDAGIKARNGFDALHIAAKQGDLDILKILMEAHPELSMTVDPSNTTALHTAATQGHTEIVKFLLEAGSSLATIARSNGKTALHSAARNGHLDVVKAILEKEPGVVTRTDKKGQTALHMAVKGQNLEVVEELIKADPSSINMVDNKGNTALHIATRKGRIQIIKLLLGQNETNGMAINKSGETALDTAEKTGNSQVKEILIEHGIQIGKSIKSQPTTTTARELKQTVSDIKHEVHHQLEHTRQTRKSVQGIAKRLNKMHTEGLNNAINSTIVVAVLIATVAFAAIFTVPGQFVDDPKHIPAGKSLGEANIAPKAAFLIFFVFDSVALFISLAVVVVQTSIVVIESKAKKQMMAIINKLMWLACVLISVSFLALSFLVVGKDERWLAISVTIIGTIIMATTLGTMCYWVIRHRIEASNLRSIRKSSLGSRSRSFSVSVMSDSEILNNDRRKICFENQNFLLPSFIFFSIVDKKRQNDKRQLSKYIVIDTCRSHGETEEQHFIFRDQNTQHFILLPRKIKSETHCKFPSVREDRNMDDELLELQRQFEFAQQAKSSIRLSDRNVVELVQKLQQLQIIDFELLHTASGKEYITLDQLRNEMVAEVKKLGRISVIDLADVTGVDLYYVEKLAHNIVTDHRELMLTQGEIITESYWDSTAEEINERLQECSQIALTELAAQLNVGLDLIASVLEPRLGTIVKGRLEGGQLYTPAYVARVSAMVRGAARGITVPMNLTVLWSSLQNLLQEMDGASGVAVDGSFFQSLFNGLVKGGEILGSVRAGVHWTPAVFAVAQKESVDSFFSQNSFINYDVLHKLGIPQPIQFLQSRYPEGKPLVTTFVHPSMIEMLDAATEDALERGSWSDSLSLLPSSFTPQDASKMLFLCQSVQLALKSNKAHIFGDFYVLSSSFMKDICDRLVKELETLAVSRSLGTAKSGDLQKASEVNVGYDSSRLSESNETASDGGSNKHADKGTKKKRGKAAGNALANQSESAPDNQEQISTKSKKSQRRGKDTSSQTSDSKPGSRKESHKMKEDDLSSPSEEWIMKKITALIPDFEEQGIDDPETILRPLANQLRPTIINTWMEKKKALLKDNAERMKHLLDNLQKKLDESFLNMQLYEKALELFEDDQSTSVVLHRHLLRTVAAPMVDMLLHDLDEHNKLKNGVDVLESSNSEPISLSSGDRAAIAKSFPGALANKALAVVEALEGKRVETFMTAFRIVTEESGLPLKKLDKKLERTLLHSYRKELTSEVSAETDPVSLLPKVVSLLYVQAHHKALQAPGRAISVAISQLKDKLDESACKILADYQTATVTLLALLSAAPDDKESCASDRILSKRELLESQMPILKSLVLSSSQS 1446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03544 1446 SUPERFAMILY Ankyrin repeat 34 299 IPR036770 -
Car06g03544 1446 ProSiteProfiles Ankyrin repeat profile. 104 136 IPR002110 GO:0005515
Car06g03544 1446 ProSiteProfiles Ankyrin repeat region circular profile. 104 126 - -
Car06g03544 1446 MobiDBLite consensus disorder prediction 1037 1053 - -
Car06g03544 1446 MobiDBLite consensus disorder prediction 1 42 - -
Car06g03544 1446 Coils Coil 1177 1211 - -
Car06g03544 1446 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 9 545 - -
Car06g03544 1446 MobiDBLite consensus disorder prediction 1091 1105 - -
Car06g03544 1446 MobiDBLite consensus disorder prediction 1074 1090 - -
Car06g03544 1446 ProSiteProfiles Ankyrin repeat region circular profile. 240 261 - -
Car06g03544 1446 Gene3D - 11 167 IPR036770 -
Car06g03544 1446 ProSiteProfiles Ankyrin repeat profile. 240 261 IPR002110 GO:0005515
Car06g03544 1446 ProSiteProfiles Ankyrin repeat profile. 172 204 IPR002110 GO:0005515
Car06g03544 1446 SMART ANK_2a 172 202 IPR002110 GO:0005515
Car06g03544 1446 SMART ANK_2a 206 236 IPR002110 GO:0005515
Car06g03544 1446 SMART ANK_2a 274 303 IPR002110 GO:0005515
Car06g03544 1446 SMART ANK_2a 240 273 IPR002110 GO:0005515
Car06g03544 1446 SMART ANK_2a 30 61 IPR002110 GO:0005515
Car06g03544 1446 SMART ANK_2a 104 133 IPR002110 GO:0005515
Car06g03544 1446 SMART ANK_2a 138 167 IPR002110 GO:0005515
Car06g03544 1446 SMART ANK_2a 69 97 IPR002110 GO:0005515
Car06g03544 1446 ProSiteProfiles Ankyrin repeat profile. 138 170 IPR002110 GO:0005515
Car06g03544 1446 Pfam Ankyrin repeats (3 copies) 172 235 IPR002110 GO:0005515
Car06g03544 1446 Pfam Ankyrin repeats (3 copies) 99 165 IPR002110 GO:0005515
Car06g03544 1446 ProSiteProfiles Ankyrin repeat region circular profile. 138 165 - -
Car06g03544 1446 ProSiteProfiles Ankyrin repeat region circular profile. 206 228 - -
Car06g03544 1446 ProSiteProfiles Ankyrin repeat profile. 206 228 IPR002110 GO:0005515
Car06g03544 1446 Pfam Domain of unknown function 355 470 IPR026961 -
Car06g03544 1446 Pfam Ankyrin repeat 241 264 IPR002110 GO:0005515
Car06g03544 1446 MobiDBLite consensus disorder prediction 1112 1130 - -
Car06g03544 1446 ProSiteProfiles Ankyrin repeat region circular profile. 172 195 - -
Car06g03544 1446 Gene3D - 168 343 IPR036770 -
Car06g03544 1446 PANTHER ANKYRIN REPEAT PLANT PROTEIN 9 545 - -
Car06g03544 1446 Pfam E3 UFM1-protein ligase 1 631 915 IPR018611 GO:0061666|GO:0071569
Car06g03544 1446 MobiDBLite consensus disorder prediction 1037 1130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03544 Car-Chr6 66618798 66632281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03544 628 1410 EF-hand Containing Proteins AT3G46220 61.881 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03544 K22755 - gmx:100808087 1282.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03544 06 66618798 66632281 Car06g03544 06 66618798 66632281 ECH