Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03543 ATGATAGATAACATTCAACACCAAATTGGAATGAAGGGCACAAGAACTCGCTCTTTTGACTCAGTGAATTATCAGTCTTCTCCAAACGATTCTTCTTCAAATCTTCCAGATGGAACTATGCAAGGGATGCACAACATTCATGGAGGCTTTAATGTTCCCAACATGACTGGTACTCACACACCAAGAAACTCCATGATAAATAATGTTCCGCCTGGGGGTGTTCACCAACAAATAGGAAGCTTTCCTGGTGGAAGATTTGCATCCAACAATTTCCCTGTTGCATTATCACAGCCATCTTACGGAAGCTACCCTGGATATTCAGGATTCACCAATAGAGGAGGTACAAGTTTTGTAGGAAACCCTGGATTTAGTAATAGCCCAAGTGGAATTGGTGGTTCTTTTCCCAGGGTTTTTCCATCTATTGGACATCATAATGCTGGTCCAGCGTTGGGAGTATCCCCAATTTCGGGAAATGCAGGTCCTCGGATCACTAATTCAGTGGGAAACATGGTTGGAGGGGGAAATATTGGATGGACTGGTGGGTTAGGCATGCAAGGGCAAAATCAATTCACGAGTAGTGTGCTTCCACAAGGATCTCCACAGGTGATTTCAATGCCAGGGAATTCTTATCCTAGTGCTGGAGGTCAGCTTTCCCAAAGCTATGTTCAACCAGCAAGTAGCTTGAACACTATGGGGATGTTGAATGACATAAATCCCAATGATAGTTCATCTTTTGACCTCAACGATTTCCCTCAACTGACAAGTCATCCTAGTTCTGCCGGAGGACCTCAAGGGCAGTTGGGTTCTTTACGGAATCAGGGTCTTGGCGTTAGTCCTGTTCAACAAAACCAAGAGTTTAGCATTCAAAATGAAGATTTTCCGGCTTTACCAGGATTCAAAGATTATGCTAAAGAACAACCTCATGACAATGCTGTGCCGATGATGCAATCTCAGCATTTCTCTCAGATGGGAAGGTCTGCTGGTTTCAGCTTGGGAGGAACATATTCATCCCATCATCCCCAACCACAACAACATAATCCTTCAGTCAGTAGTGGCAGTGTCTCGTTCTCATCTGTCAACAACCAGAATCTTCTCCATCAACATGGATCGGATATTTTTCCATCTTCTAATTCTTCCTATCATTCACAGACCAGAGAACCTCCTGGCATTGGATTAAGGCCTTTAAATTCTCCAAATACAGTTCCTGGCGTGGGTTCATACAACCAGCTCAGCCAGCAATATCAACAGCAACAGAACCAACCCCAGTTTCATCTTCAAATGCCATTTCTAAATCAGTCTTTTAGGGATCATGACATGAAGTTTATGCAACCTGCACAATTTAAACCAGATCCATATGGTTTGCTTGGCCTGATAAATGTAATCCATAGGGGTGATCCTCTTGCTCTTGGACTTGATCTAACTCAACTTGGCTTTGATTTGAATTCATCAGAAAATCTTCATGAGACTTTTAAGTCTCCATGGGCAGAAGGGCCAGCTAATGATGATCCAAAGTTTAATGTGCCACAATGTTATTACGCTGAACAACCACCTGCTCTACGTAAACTTTATTATACTAAGTTTTCGGTGGAAACATTGTTTTACATATTTTACAGCATGCCCAAAGACACAGCACAACTATATGCTGCAGATGAGCTCTATGAAAGAGGTTGGTCTTACCACAAAGAGCGTTGTTTTTGGTTTATAAGATCCCCCAACAAGGAGCTGCTGGTGAAAACACACACACACGAGAGAGGAACTTATCACTATTTTGATTCAAGCTCTTTTGAAATCCGCGAGGAAAATTTTGTTGTTCGTTATGAAATGGTGGAAAAAAGACCTCATCTAACACAATAG 1854 0.4223 MIDNIQHQIGMKGTRTRSFDSVNYQSSPNDSSSNLPDGTMQGMHNIHGGFNVPNMTGTHTPRNSMINNVPPGGVHQQIGSFPGGRFASNNFPVALSQPSYGSYPGYSGFTNRGGTSFVGNPGFSNSPSGIGGSFPRVFPSIGHHNAGPALGVSPISGNAGPRITNSVGNMVGGGNIGWTGGLGMQGQNQFTSSVLPQGSPQVISMPGNSYPSAGGQLSQSYVQPASSLNTMGMLNDINPNDSSSFDLNDFPQLTSHPSSAGGPQGQLGSLRNQGLGVSPVQQNQEFSIQNEDFPALPGFKDYAKEQPHDNAVPMMQSQHFSQMGRSAGFSLGGTYSSHHPQPQQHNPSVSSGSVSFSSVNNQNLLHQHGSDIFPSSNSSYHSQTREPPGIGLRPLNSPNTVPGVGSYNQLSQQYQQQQNQPQFHLQMPFLNQSFRDHDMKFMQPAQFKPDPYGLLGLINVIHRGDPLALGLDLTQLGFDLNSSENLHETFKSPWAEGPANDDPKFNVPQCYYAEQPPALRKLYYTKFSVETLFYIFYSMPKDTAQLYAADELYERGWSYHKERCFWFIRSPNKELLVKTHTHERGTYHYFDSSSFEIREENFVVRYEMVEKRPHLTQ 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03543 617 MobiDBLite consensus disorder prediction 1 40 - -
Car06g03543 617 MobiDBLite consensus disorder prediction 51 74 - -
Car06g03543 617 PANTHER CCR4 NOT-RELATED 180 617 IPR040168 GO:0030015
Car06g03543 617 MobiDBLite consensus disorder prediction 324 406 - -
Car06g03543 617 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 16 177 - -
Car06g03543 617 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 180 617 - -
Car06g03543 617 MobiDBLite consensus disorder prediction 324 385 - -
Car06g03543 617 MobiDBLite consensus disorder prediction 189 218 - -
Car06g03543 617 PANTHER CCR4 NOT-RELATED 16 177 IPR040168 GO:0030015
Car06g03543 617 MobiDBLite consensus disorder prediction 1 81 - -
Car06g03543 617 Pfam NOT2 / NOT3 / NOT5 family 488 608 IPR007282 GO:0006355
Car06g03543 617 Gene3D - 445 617 IPR038635 -
Car06g03543 617 MobiDBLite consensus disorder prediction 236 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03543 Car-Chr6 66588330 66597571 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03543 K12605 - gmx:100783662 788.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03543 06 66588330 66597571 Car06g03543 06 66588330 66597571 ECH