Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03514 ATGGACGAAACATTCTCTAACAATAATAACAATATTCCAATCGAGATTGTTACCGACGAAGAAATGGCTTTTATTGAAGctgcttatgcttccgtttctccatctcttttcattcgttcttcttcttcttcaaccccttcttcttctcctCATCGGTTATTACACACAAATGCAATCTCCATTAACTCAATCACTCTTCTATCCAAAAGAAGACTATCATCATCTTCTTCTGATATCGAAGACACTCTCAATTTTGTTAATGCTACCAAGAAACCATCTCTTACTGATTCCCTTCTTCGTCGTTTCAGAAGGAAACGTGCCTTGTCCGTCACTGATCTTACTTCCACGGAATGGTGCCCAAAACAAATGGAATTTTCACTCGTTCTTGGAGGGCGAAAGGTCAATCAATTTATGAAAGCTGGCATTGCTCGACATGCAAAACTTGAAGAAGAGGTTATAAAACGGGTGGAAGTGAAGGTCAAATCACAAGAAGATCGCTGGGCCCTGAAATTTCTTAATTTTATAAATGGTGTGAATCAATTGTTGTTTGAAGGATTAACTCGGGAACTGCCGATAATAGGCTTTGCAGAAGGTATATGGATGATAGGAGTGATTGACGAGGTTCGGATGCCATTAACTGAAAATGATCATCATAACCCAATACTTATTGACACAAAGACTCGTGCTCGAGATACGCTTCCCGCTGAACCACAACGAAGAAATGGAAGGCTTCAATTGATGTGTTACAAGTATATGTGGGACAACTTAGTTGCTGATAATTTTCCTTCTAAAAACTTTTTTACTTATTTTGATTTAAACCCTCAAAGTATTCTATGTGAAGATCTCAAAGTGATAAGTGCTGACTCTGGATTTTCTGCTTTGACCCTTGATGATGTGGTGAGATATTACAGAAACACATACATGATGTTGTCCCCTGCTCATGATCAGCTTTTATTGAGATATGAGTATCAGAAAGATCATTCATTACTTTGTGAAGATAAATTTGCATATGAAGCTGAGTGGTTAAAGAATCAAATTCGTTCTTGTCTCGAGTTTTGGCTTGGAGAGCGAGAAGCTGCTTATGTTCATGAGGAGGAGCGCTGGAAATGTCGGTTCTGTCAATATGCCACTGTTTGTCCTGCGTATACTGATAGTAAGGAAGCGAGTGCCAATACAAGCAATGATTCAAAAGCTAAAGAAGGCTAG 1206 0.364 MDETFSNNNNNIPIEIVTDEEMAFIEAAYASVSPSLFIRSSSSSTPSSSPHRLLHTNAISINSITLLSKRRLSSSSSDIEDTLNFVNATKKPSLTDSLLRRFRRKRALSVTDLTSTEWCPKQMEFSLVLGGRKVNQFMKAGIARHAKLEEEVIKRVEVKVKSQEDRWALKFLNFINGVNQLLFEGLTRELPIIGFAEGIWMIGVIDEVRMPLTENDHHNPILIDTKTRARDTLPAEPQRRNGRLQLMCYKYMWDNLVADNFPSKNFFTYFDLNPQSILCEDLKVISADSGFSALTLDDVVRYYRNTYMMLSPAHDQLLLRYEYQKDHSLLCEDKFAYEAEWLKNQIRSCLEFWLGEREAAYVHEEERWKCRFCQYATVCPAYTDSKEASANTSNDSKAKEG 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03514 401 Gene3D - 90 381 IPR011604 -
Car06g03514 401 Pfam Exonuclease V - a 5' deoxyribonuclease 216 279 IPR019190 GO:0045145
Car06g03514 401 Pfam Exonuclease V - a 5' deoxyribonuclease 309 379 IPR019190 GO:0045145
Car06g03514 401 Pfam Exonuclease V - a 5' deoxyribonuclease 97 211 IPR019190 GO:0045145
Car06g03514 401 Coils Coil 146 166 - -
Car06g03514 401 PANTHER EXONUCLEASE V 4 397 IPR019190 GO:0045145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03514 Car-Chr6 66089443 66094231 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03514 K17815 - gmx:100792136 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03514 06 66089443 66094231 Car06g03514 06 66089443 66094231 ECH