Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03501 ATGATGTTGAAGAAGCAATCTCATATCTTATCTTTTACAATAGTAATACTATTTTCTCTATTGTATTCCACAACAACAACTTTATCTCAATTATCACCTGCTAATGCTCCAATACAGCCTACACTACCGGGTGCGGCTCCACCAGCCGCATCCCCGAAACCATTGGTTCCGTCATTACCACAATCACCGAGTGATTCGACACCTGACACTTCATCAGTTGATATCGTCGGAATACTAAGACAAGCAAAATCATTCAACGTATTCATTCGTCTAATGAAAACAACACAATTGATAAACCAACTGAATTCACAACTATTGACAACAAAATCAGGAGGGTTAACAATTCTTGCACCAGATGACAGCGCGTTCTCAGAACTAAAAGCAGGGTATCTGAACTCTCTATCAGACGGACAGAAATTGGAACTATTACAGTTTCATGTAATATCAGAGTATGTATCTAGCTCTAATTTTGATACTCTAACCAACCCTGTCAGAACACTCGCTGGAGCCAAACCTGGAAAAGTAGAACTCAATGTCATAAGTTATGGTGGAAATGTCAACATATCAACAGGGGAAGTCAACACAACAATAAATGGCATTATATATACTGATAAACATCTTGCTATTTATAAAGTTGCCAAAGTGCTTCTTCCTGTTGATTTCTTTGCCGTTGCTAAGGCGCCAGCAAAGGCGAAGGGACCGTCTTTGGCGCCGGGACCTTCTGTTGATGCAGCAAAGGCGCCTAAAGCTGATAAGGATACATCCTCAGATTCTTCACAGGTGATTAATCCCACTCATGAGAGTTCTGCTTCTGTGAAGATTGTTTATGGAACATTTGGATTTGTATTATTAGCTTTGGTGGGTATGACGCAAATCTGA 879 0.4016 MMLKKQSHILSFTIVILFSLLYSTTTTLSQLSPANAPIQPTLPGAAPPAASPKPLVPSLPQSPSDSTPDTSSVDIVGILRQAKSFNVFIRLMKTTQLINQLNSQLLTTKSGGLTILAPDDSAFSELKAGYLNSLSDGQKLELLQFHVISEYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGNVNISTGEVNTTINGIIYTDKHLAIYKVAKVLLPVDFFAVAKAPAKAKGPSLAPGPSVDAAKAPKADKDTSSDSSQVINPTHESSASVKIVYGTFGFVLLALVGMTQI 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03501 292 Pfam Fasciclin domain 84 218 IPR000782 -
Car06g03501 292 MobiDBLite consensus disorder prediction 40 61 - -
Car06g03501 292 MobiDBLite consensus disorder prediction 231 264 - -
Car06g03501 292 ProSiteProfiles FAS1/BIgH3 domain profile. 72 207 IPR000782 -
Car06g03501 292 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 9 284 - -
Car06g03501 292 Gene3D FAS1 domain 57 218 IPR036378 -
Car06g03501 292 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 9 284 IPR045003 -
Car06g03501 292 MobiDBLite consensus disorder prediction 39 70 - -
Car06g03501 292 SMART fasc_3 114 219 IPR000782 -
Car06g03501 292 SUPERFAMILY FAS1 domain 65 219 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03501 Car-Chr6 65890757 65891985 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03501 - - gmx:100794280 338.961