Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03495 ATGAGAGCAACACATTTTGTGTTTGTTTTGGTTTGGTTCCTTGGTGTTTATTTGCCTACTTATTTTTGTGTCAATGTTACTTATGATCATAGAGCATTGCTCATTGATGGCAAACGCAAGGTTTTTATCTCTGGTTCCATTCATTACCCTCGTAGCACTCCACAGATGTGGCCAGACCTTATTCAAAAATCAAAAGATGGAGGAGTTGACGTGATTGAGACTTATGTTTTCTGGAACTTACATGAACCGGTTCAAGGCCAGTATCATTTTCAAGGCAGAAGGGATTTGGTTGGATTTGTGAAGGCAGTAGCAGCAGCAGGTCTATATGTGCATCTACGGATCGGTCCTTATGCATGTGCTGAATGGAATTACGGTGGTTTCCCTCTTTGGTTGCATTTTATTCCTGGAATTCAGTTCAGAACTGATAATGAACCATTCAAGGCAGAAATGAAGCGGTTTACCAATAAGATTGTCCAAATGATGAAGAAAGAGAATCTCTATGCATCACAAGGAGGACCTATTATTTTATCTCAGATTGAAAATGAGTATGGAAACATTGATAGGGATTATGGTCCTGCTGCTAAAACTTACATTGATTGGGCAGCATCAATGGCTACATCTCTTCAAACAGGGGTCCCCTGGGTTATGTGCCAGCAGGCAGATGCACCTGATCCAATTATAAACACGTGCAACAGCTTTTACTGCGATCAATTCACACCAAACTCTGACAATAAACCGAAAATGTTTACTGAGAATTGGAGTGGATGGTTTCTTGCATTTGGAGGTGCCACTCCTTACAGACCAGTGGAAGATCTTGCATTTTCCGTGGCGCGCTTTTTTCAGCGGGGTGGTACTTTTAATAATTACTACATGTACCATGGAGGAACTAACTTTGGCCGCACAAGCGGTGGACCTTTCATTTCTACTAGTTATGATTATGATTCACCCATTGATGAGTATGGAATTATTAGACAACCCAAATGGGGCCATCTTAAAGAATTGCACAAGGCCATAAAGCTTTGTGAAGAAGCACTAATAGCTACAGATCCAAACATTACATCTCCTGGTCCAAATATAGAGATTGCAACTTACAAGACAGGAGATGTATGTGCTGCCTTCCTTGCCAACATCGACACATCGGATGCAAATGTTACCTTCGACGGCAATTCATATTACTTGCCTGGATGGTCTGTGAGCACCTTACCGGACTGCAAGAATGTTGTATTTAATACTGCAAAGATTAATTCTGCATCTACGATTTCAAGCTTCACAGCTGAATCTTTAAAAGAGGTTGATTCTTTGGACGGTTCAAGTTCAGGCTGGAGTTGGATTAGTGAACCGGTTGGTATTTCAAAGAATGATGCATTCTCAAAACCTGGACTACTGGAGCAAATAAATACAACCGCTGATAAAAGCGACTACTTGTGGTACTCATTAAGCATTAATGTTGAAGATAATGTTGGTGCTCAAACTGTCCTTCACATTGAGTCGCTTGGCCATGCCCTTCATGCTTTTATAAATGGGAAGCGTGCAGGGAGTGGAGCAGGAAACAGTGGAAATGCTAGTGTCAATGTGGACATTCCCATTACACTTGTAGTTGGAAATAACACAATTGATCTTCTGAGTTTAACAGTGGGATTACAGAATTATGGAGCATTTTTCGACACAAGGGGTGCGGGGATCACTGGTCCAGTAACATTGAAAGGTTTGAAAAATGGCAGTACCATCGATCTCTCCTCACAAACGTGGACATATCAGGTTGGCTTTAAAGGTGATGGTTTAGGTTTGGTTAGTGGAAGGGTTGGACAGTGGAATTCACAATCAACATTGCCTACAAATCAGCCTTTGACTTGGTACAAGACGAACTTTGCTGCTCCCTCGGGCACGAACCCAGTTGCAATTGACTTCACGGGGATGGGAAAAGGCGAAGCTTGGGTGAACGGGCAAAGCATTGGGCGGTACTGGCCTACATATGCCGCTCCAAGTTCTGGTTGTACCGACTCATGTGATTATAGAGGACCGTATGATTCAGGCAAATGTCTAAAGAACTGTGGAAAACCATCACAGACATTATATCATGTACCGCGATCATGGTTGAAACCAGACAACAACACTCTTGTTTTGTTTGAGGAAAGCGGAGGCGACCCTACAAAAATCTCTATAGCTACAAAACAGATAGAAAGTGTTTGCTCACACGTATCTGAATCTCACCCTCCACCTGTAAGCATGTGGAATTTAGATACAGAATCAGGAACAGAAGTAGGTCCTGTATTGTCACTGGAGTGTCCTTCTCCTAATCAAGTGATAACTTCCATTAAATTTGCGAGCTATGGAACGCCGCAAGGGACTTGTGGAAACTTCAACCACGGACGTTGCAGCAGCAATGGTGCTCTATCCATTGTACAGAAGGCCTGCATTGGATCAAGCAGTTGTAGCATTGGAGTATCAATTAATACATTTGGAAATCCGTGTAGAGGAGTAACAAAGAGTTTAGCCGTTGAAGCTGCTTGTACATAG 2517 0.4239 MRATHFVFVLVWFLGVYLPTYFCVNVTYDHRALLIDGKRKVFISGSIHYPRSTPQMWPDLIQKSKDGGVDVIETYVFWNLHEPVQGQYHFQGRRDLVGFVKAVAAAGLYVHLRIGPYACAEWNYGGFPLWLHFIPGIQFRTDNEPFKAEMKRFTNKIVQMMKKENLYASQGGPIILSQIENEYGNIDRDYGPAAKTYIDWAASMATSLQTGVPWVMCQQADAPDPIINTCNSFYCDQFTPNSDNKPKMFTENWSGWFLAFGGATPYRPVEDLAFSVARFFQRGGTFNNYYMYHGGTNFGRTSGGPFISTSYDYDSPIDEYGIIRQPKWGHLKELHKAIKLCEEALIATDPNITSPGPNIEIATYKTGDVCAAFLANIDTSDANVTFDGNSYYLPGWSVSTLPDCKNVVFNTAKINSASTISSFTAESLKEVDSLDGSSSGWSWISEPVGISKNDAFSKPGLLEQINTTADKSDYLWYSLSINVEDNVGAQTVLHIESLGHALHAFINGKRAGSGAGNSGNASVNVDIPITLVVGNNTIDLLSLTVGLQNYGAFFDTRGAGITGPVTLKGLKNGSTIDLSSQTWTYQVGFKGDGLGLVSGRVGQWNSQSTLPTNQPLTWYKTNFAAPSGTNPVAIDFTGMGKGEAWVNGQSIGRYWPTYAAPSSGCTDSCDYRGPYDSGKCLKNCGKPSQTLYHVPRSWLKPDNNTLVLFEESGGDPTKISIATKQIESVCSHVSESHPPPVSMWNLDTESGTEVGPVLSLECPSPNQVITSIKFASYGTPQGTCGNFNHGRCSSNGALSIVQKACIGSSSCSIGVSINTFGNPCRGVTKSLAVEAACT 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03495 838 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 171 183 IPR019801 GO:0004553|GO:0005975
Car06g03495 838 Gene3D Glycosidases 23 341 - -
Car06g03495 838 SUPERFAMILY Galactose-binding domain-like 582 744 IPR008979 -
Car06g03495 838 Gene3D - 740 838 IPR043159 -
Car06g03495 838 PRINTS Glycosyl hydrolase family 35 signature 36 53 IPR001944 GO:0004553|GO:0005975
Car06g03495 838 PRINTS Glycosyl hydrolase family 35 signature 57 75 IPR001944 GO:0004553|GO:0005975
Car06g03495 838 PRINTS Glycosyl hydrolase family 35 signature 112 131 IPR001944 GO:0004553|GO:0005975
Car06g03495 838 PRINTS Glycosyl hydrolase family 35 signature 169 184 IPR001944 GO:0004553|GO:0005975
Car06g03495 838 PRINTS Glycosyl hydrolase family 35 signature 248 263 IPR001944 GO:0004553|GO:0005975
Car06g03495 838 PRINTS Glycosyl hydrolase family 35 signature 285 300 IPR001944 GO:0004553|GO:0005975
Car06g03495 838 PRINTS Glycosyl hydrolase family 35 signature 305 321 IPR001944 GO:0004553|GO:0005975
Car06g03495 838 PRINTS Glycosyl hydrolase family 35 signature 614 628 IPR001944 GO:0004553|GO:0005975
Car06g03495 838 PRINTS Glycosyl hydrolase family 35 signature 641 657 IPR001944 GO:0004553|GO:0005975
Car06g03495 838 Gene3D - 571 664 - -
Car06g03495 838 Gene3D - 678 733 - -
Car06g03495 838 Pfam Galactose binding lectin domain 760 837 IPR000922 GO:0030246
Car06g03495 838 Pfam Glycosyl hydrolases family 35 33 337 IPR031330 -
Car06g03495 838 Pfam Beta-sandwich domain in beta galactosidase 345 414 IPR041392 -
Car06g03495 838 PANTHER BETA-GALACTOSIDASE RELATED 5 832 IPR001944 GO:0004553|GO:0005975
Car06g03495 838 ProSiteProfiles SUEL-type lectin domain profile. 752 838 IPR000922 GO:0030246
Car06g03495 838 PANTHER BETA-GALACTOSIDASE 5 832 - -
Car06g03495 838 Gene3D - 412 568 - -
Car06g03495 838 SUPERFAMILY (Trans)glycosidases 25 342 IPR017853 -
Car06g03495 838 SUPERFAMILY Galactose-binding domain-like 398 570 IPR008979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03495 Car-Chr6 65842544 65847816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03495 23 691 Glycoside Hydrolase AT2G28470 73.568 0.0 1038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03495 - - gmx:100793198 1438.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03495 06 65842544 65847816 Car06g03495 06 65842544 65847816 ECH