Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03490 ATGCTCAACATATCATCCATACAAGGACGGTTTCTTCTCAATACTTCTCTTCTACCAAATTTATCTTTTCGAGGGGTGTGTAGGTTGGCGCTTGGTCGACGTTTGCAACAGAGTCAAGGGATTAGAAGAAGGGGTTTCTCCAAAAACATGGCTTGGAGTATGGATAGATGTGAGTTGGGTCTTGAAGTCAAGATTGGGGTTGTTCATCCTGCAACCGATGCTTATGCTGCAGAGGCAGTTGAAGCTTTGAAAGCTGGGAAGGTCATTGCTGTTCCCACTGATACACTATATGGATTTGCTTGTGATGCTTGCTCATTGGAAGCAGTTAACAGGATTTACGATATTAAGGGCCGTAAACATACAAGCCCGCTAGCTATTTGTGTTGGTGACGTAGCAGATATAGACCGTTTTGCCGTCACTGATCATTTACCTCGTGGTCTCCTTGATGACCTACTACCAGGGCCTGTTACAGTTGTACTACAACGAGGCGAGTCTAGTGCTCTTGAACAAAGTTTGAACCCAGGATTTGATAGTATAGGAGTTAGAGTGCCTGATTGCAATTTCATCCGGAACATTGCCCGTGGTTCAAGAACTGCTGTGGCCCTTACCAGCGCAAACCTTAGTGGACAACCAAGTAGTGTTTGTGTCAAAGATTTCGATAAACTATGGGAACACTGTGCTTCTGTTTATGATGGTGGTTTGCTTCCATCAGGTCGTGCGGGTTCAACAGTTGTGGATCTCACTATACCACACAAATACAAGATACTTAGACCTGGAAGTGCAAGGGAAGAGACAGTTGCCATCTTGGAGAAGTATTCTTTTTTCGAGACAGTGTGA 837 0.4456 MLNISSIQGRFLLNTSLLPNLSFRGVCRLALGRRLQQSQGIRRRGFSKNMAWSMDRCELGLEVKIGVVHPATDAYAAEAVEALKAGKVIAVPTDTLYGFACDACSLEAVNRIYDIKGRKHTSPLAICVGDVADIDRFAVTDHLPRGLLDDLLPGPVTVVLQRGESSALEQSLNPGFDSIGVRVPDCNFIRNIARGSRTAVALTSANLSGQPSSVCVKDFDKLWEHCASVYDGGLLPSGRAGSTVVDLTIPHKYKILRPGSAREETVAILEKYSFFETV 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03490 278 SUPERFAMILY YrdC/RibB 76 264 IPR017945 -
Car06g03490 278 ProSiteProfiles YrdC-like domain profile. 73 261 IPR006070 GO:0003725
Car06g03490 278 TIGRFAM TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 76 266 IPR006070 GO:0003725
Car06g03490 278 PANTHER YRDC DOMAIN-CONTAINING PROTEIN, MITOCHONDRIAL 39 276 - -
Car06g03490 278 Pfam Telomere recombination 81 259 IPR006070 GO:0003725
Car06g03490 278 PANTHER SUA5 39 276 - -
Car06g03490 278 Gene3D DHBP synthase 64 271 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03490 K07566 - mtr:MTR_4g459430 363.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03490 06 65792468 65795883 Car06g03490 06 65792468 65795883 ECH