Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03474 ATGCTCAATGTCTTGTTTTGTATTGCTGATGGTCTACAGGTCGAGGCAGTATTGGACAAGGAGAACTACAGTTTGGAAGAGCTTCTGGATGAAGAAGAAATAATCCAGGAATGCAAGGCCTTGAACAGTCGTCTCATTAACTTTCTGAGAGATAAAGCACAGGTTGAGCAATTGCTTCGCTACATTATTGAAGAACCACCAAACAATGCGGAAAATAAACGGGTCTTCAAGTTTCCGTTCATGGCCTGTGAGATCTTTACATGTGAAATTGATGTCATTTTGAAGACCTTGGTGGATGAAGAGGAGCTCATGAACTTATTATTCTCCTTCTTGGAACCTGATCGTTCTCATAGTACCTTGCTGGCTGGGTACTTCAGCAAGGTTGTTGTTTGTCTAATGATCCGGAAGACAGGACCACTTATCAGTTATGTTCAAGCCCATCAACATGTATTTCGCCAACTGGTTGATTTGATAGGCATAACCTCCATCATGGAGGTTTTGGCTCGATTAGTTGGTGCGGATGACCATGCATATCCCAACTTTATAGATGTGATGCAATGGTTGGCTGAGAGCAACCTGCTAGAGATGATTGTTGATAAATTAAGTCCCTCGAGTCCTCCTGAAGTCCATGCCAATGTAGCTGAAACATTATGTACAATAACCCGGATTCCATCATCCACTTTAGCTATTAAGCTTTCAAGTCCAAGTTGTGTTGCAAAAATTTTGGATTACGCATTGGAAGATTCACAATCGAAGTCTAGCCTTGTCAACTCACTTTCTGTGTGTATTTCTTTGCTGGATCCCAAAAAATCAGCTTTTTCATCTCCACTTTTTCATTCATTCCGAAATCAAAACATGTATGAACCACTAATTCCTGTAAACCCAGATACTATTGGTGCAATGCTCCCTAAAGTTGGTGACTTGCTTGTGCTTTTGGATGTGTCATCTGATGACAAGGTATTGCCGACAACATATGGTGAATTGAGACCTCCACTTGGCAAGCATCGATTGAAGATCGTGGAATTTGTTGCAGTACTTTTAAAAACCAGAAATGAAGTGGCAGAAAAAGAATTGGTCAACTCAGGAACCATTGGACGAATCGTTGACCTTTTCTTTGAGTATCCGTACAATAACTCCTTACACCATCACATAGAAAGTATCATCTTTTCATGTTTGGAGAGCAAAGCTGATGTCATTATTGATCATCTTCTCCGAGATTGTGATTTAATTGGGAGATTTCTCCAAGTAGATAAGCAATGTACTCTTTCTGCTGAAGGCAATCAGCGAACAGTACCTGCGGCTGGAAAACGGGCGACACGGGTAGGAAACATTGGACATATTACCAGAATTGGTAATAAACTCATTCAGATGGCTCACAACCAAAGCCACATTGTGGCATGTCTTCAGGAGAACCATGCGTGGAATGAGTGGCAAGCTACAGTTCTTCAGGAGCGGAATGTGGTTGAGAATGTTAACCGTTGGGCTTGTGGACGTCCAACTGCATTACAAGATAGGATGAGGGATAGTGATGACGATGATATTCATGATAGAGACTATGACGTTGCAGCATTAGCAAATAATTTGAGCCAGGCTTTTGGATACAAAATTTATGGAAATGAGGAGAATGAAGAGGATCATGGTGGTGTTGAACGAGATGACGAGGATGTCTACTTTGATGATGATTCTGCTGAAGTAGTCATATCGTCACTTAGACTTGGTGACGATCAAGGGAGCAATCTGTTTACAAACTCCAACTGGTTTGCATTCCAAGATGACAGCATTGGTGATGAAACTGGTGGAAGATCATCCTCTGAAATGATGGATGAGATAAACTTGAATGGAGCTGTAAATGGTGGTAGAAACAGTAGTGATGATGAGGTAGTGGTTGGAGAGGATGAAGAATTAGCTGACAGCAAAAATACTGTGAATGGCACGTCTACCTCAAGCCCAAACATACTCAATGGATTAACTGGTAGTGATTCCATGAATGAAGGCACTTCAGATTTTGAAAGTGAGAAAGCAAGCACTTCGCATGACATGGGATTCCACAAGTTTGAGGCAACAGAGGATGAGGACTTGTTTGGGGAGAGGCCTTTACCAGATTGGGTAGGATGGGGTGAGCCATCAGATATGCAAGTTGCTGGCTCAAGTATGAATCCTTTTATAGATCATGGTGACTCTGCTAGTAATTTGTCAGTTAAGTCTCATCTTGGCAACCAGAATACGAATTCTTCAAATGGGGAATCTTTATTATCAAATGGGTCACCGGTTACTAGAGACTCAATGGATGGGGGTGGAGATTCAAGTCAAAGATCGGTAGCTGTACCGTCGTTATTTGAAGAGGATGTGGAGTTTGTAGGTGTAGAGTTAGAAGGGACGGGTAAGGCAATGGAACAAGCTCTCAAAGAAGGGATAGTTGGGGAAGCCGAGCCATTAAAAAGAAACGTAGTGCCAAAAGTGCCAGAAAAGGAAAGTTCTGAAGAGGACAGTCCTGGTGTGAAGGAGTTCAATGATGCAAATTACTGGAGGGTTGACCAAGAGGTTGCTGTTCTAGATTGA 2559 0.4205 MLNVLFCIADGLQVEAVLDKENYSLEELLDEEEIIQECKALNSRLINFLRDKAQVEQLLRYIIEEPPNNAENKRVFKFPFMACEIFTCEIDVILKTLVDEEELMNLLFSFLEPDRSHSTLLAGYFSKVVVCLMIRKTGPLISYVQAHQHVFRQLVDLIGITSIMEVLARLVGADDHAYPNFIDVMQWLAESNLLEMIVDKLSPSSPPEVHANVAETLCTITRIPSSTLAIKLSSPSCVAKILDYALEDSQSKSSLVNSLSVCISLLDPKKSAFSSPLFHSFRNQNMYEPLIPVNPDTIGAMLPKVGDLLVLLDVSSDDKVLPTTYGELRPPLGKHRLKIVEFVAVLLKTRNEVAEKELVNSGTIGRIVDLFFEYPYNNSLHHHIESIIFSCLESKADVIIDHLLRDCDLIGRFLQVDKQCTLSAEGNQRTVPAAGKRATRVGNIGHITRIGNKLIQMAHNQSHIVACLQENHAWNEWQATVLQERNVVENVNRWACGRPTALQDRMRDSDDDDIHDRDYDVAALANNLSQAFGYKIYGNEENEEDHGGVERDDEDVYFDDDSAEVVISSLRLGDDQGSNLFTNSNWFAFQDDSIGDETGGRSSSEMMDEINLNGAVNGGRNSSDDEVVVGEDEELADSKNTVNGTSTSSPNILNGLTGSDSMNEGTSDFESEKASTSHDMGFHKFEATEDEDLFGERPLPDWVGWGEPSDMQVAGSSMNPFIDHGDSASNLSVKSHLGNQNTNSSNGESLLSNGSPVTRDSMDGGGDSSQRSVAVPSLFEEDVEFVGVELEGTGKAMEQALKEGIVGEAEPLKRNVVPKVPEKESSEEDSPGVKEFNDANYWRVDQEVAVLD 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03474 852 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 11 850 IPR007587 GO:0019903|GO:0043666
Car06g03474 852 MobiDBLite consensus disorder prediction 639 670 - -
Car06g03474 852 MobiDBLite consensus disorder prediction 613 678 - -
Car06g03474 852 MobiDBLite consensus disorder prediction 815 834 - -
Car06g03474 852 Pfam SIT4 phosphatase-associated protein 131 356 IPR007587 GO:0019903|GO:0043666
Car06g03474 852 Pfam SIT4 phosphatase-associated protein 357 490 IPR007587 GO:0019903|GO:0043666
Car06g03474 852 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 6 REGULATORY SUBUNIT 3-LIKE ISOFORM X1 11 850 - -
Car06g03474 852 MobiDBLite consensus disorder prediction 714 773 - -
Car06g03474 852 MobiDBLite consensus disorder prediction 808 838 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03474 Car-Chr6 65284810 65303132 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03474 K15501 - gmx:100805409 1355.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03474 06 65284810 65303132 Car06g03474 06 65284810 65303132 ECH
Car01g02503 01 50731704 50739724 Car06g03474 06 65284810 65303132 PCT