Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03466 ATGAGTTTTAGTCGAAATTCGACACTGAGAAATGGAGATTCCTTGGAAGGAATGTTGAATGACTATGTTGTTGGAAAAACCAAAATGAAACCTCAAAAAAATGGTTCCACAAAATTTGTTGCAGCACTAACATGTCTACAATTTTTCTTTGCAGTATATGCAACATTTTTATTGTATTATATGGGACCATCAATTGATTTAAGAACAAAACCAGATTTCACAAGAATAGCACAACATTGGAAACAACTCATGATCACACCACACACTGTAGGACATTACCAAGAATCTGCTTCTTCACTCATTCAAGAAGAAAATAATCAATTTCAACCCACAATTCCTTCCCTTGTTTGTGAGAATGAGAAAATAGATTTCTTGCAGAAGAAGTCAAATGATTCTCAAATGATAAAGATAAAAAGAAACCTTTATGAAGAGATCATGGATTTCCAAAGTAAAAACATTGGAACTGAGACACTTGAAGAGCTTATGAAAATGAAATCCAAATGGGATATAAAAGTTCCAAATCATAAAAAACCAAAAATCACTGTTTTGTTGAACCACTTCAAGAGAAAAACACTTTGTTCTCAACTTGATTCTTTGCTTCAACAAACACTTCCTTTTCATCATGTTTGGGTGCTTTCGTTCGGGAGTCCCAACGAGGCTTCGCTTAAGAAAATCGTGGAAAGCTATAACGATACAAGAATCAGTTTCATAAGCTCAAGTTATGATTTTAAGTACTATGGAAGGTTTCAAATGGCTTTGCAAACAGAAGCTGATTTGGTTTACATTGTTGATGATGATATGATACCTGGAAGGAAAATGTTGGAGATTTTGGCACATGTTGCTGGGACTGATAAGTATAAGAACTCTGTTTTGGGAAGTATTGGGAGGATTTTGCCTTTTAGACAGAAGGATTTTACTTTTCCAAGTTATAGAAAGTTTAAGTCTAAAGAAGCTGGTTTGTATTTGCCTGATCCTGCTTATGATATCACTATTGATAAAATTGTGCAGGTTGATTTTCTTTCAAGTTCTTGGTTTTTATCTGCTGAGCTTGTTAAAACACTCTTCATTGAGACACCTTTTACCTTCTCTACTGGTGAAGATCTACACCTCAGCTATCAGCTTCAAAAGTATAGAAATGCAGGGTCATTTGTTCTACCAGTAGATCCAAAAGACAAAGAAACATGGGGTGATAGTGAACACAGACTAGCATATGTATCAGAAACCACAGTAATATTCAAGGACGTAGTTCAAGTAAGAGATGATCAATGGTGGAAAGCACTTTCATCAGGTTACATAACACAATGGGCAGCAATGAACCCTCAAAAGATTGATGCACTTTTCTATGCTCACACAGTTGATGAAGTGAAAGCACTTTCACCCCTCCTTGAAAAATTCAGGACAACAGTTGGCAAAAAGGCCTACATAGTTGTCTCTGGAGGTACCTTCTGTCCTTGTGAACATGCTGCTAAGGCACTCAAATGGCCTTTCTTGGTGTGCAAGGAACGTAGATTTAAGATATTTGATTTGGACATTGGTGCAATTTCTTCTGAGGTGTCAAACTCTGAGGCACCTGTTATACAAGCTGTGTATTCTAGCTTGAAGGGTTTGATTAAGATTCATAATCCAAGTGTGGTTATTGCTGTGGATGATATTGATGATAATGTTAGAAAGGCTTTGAAGATGGCTTCAGAAACTAATTCAAATGGTACTGCATTGGTTCTTTTGCCTAAGCCTTCTGTTTCTAAAGTTCTTTGGATGGCTGATTTGAGATCAACAGCATTGCCAAATTGGAACAAAATGAGGCTTACAATCAGTATCATCACACAAAACAGGGTCAACTCACTATCAAGGCTACTGAAATCTCTCTCCAATGCATACTATCTTGGAGATGAAGTTCCAATTACCTTCAACATGGACAGTAAGGTAGATGAATCAACTATAAAACTAGTAGGTTCATTTAATTGGCCACATGGACCAAAAACACTAAGAAGAAGAATCATACAAGGTGGTCTAATAAGAGCAGTAAGTGAAAGTTGGTATCCATCTTCAGATAATGACTTTGGTTTACTCCTTGAAGATGACATTGAAGTCTCACCTTATTACTATCTATGGATCAAATATGCACTCATGTCATATCACTATGACCCTCAAGTCTCTCTCCCTGAACTCTCTTCCATCTCCCTCTACACACCAAGAATTGTTGAAGTTGTCAAAGAAAGACCAAAATGGAATGCAACACAATTCTTCAAACAAATCCATCCAAACACACCTTACCTTCATCAATTACCATGTAGTTGGGGAGCAGTGTTCTTCCCTAAACATTGGAGAGAATTCTATGTTTACATGAACATGAGATTCACTGAGAATGCTAAGGAAAACCCAGTTCAAATTCCAAAGTCTAGAACAAATGGTTGGCAAGCTTCATGGAAAAAGTTTCTTATAGACATGATGTATTTAAGAGGGTATGTTAGTCTTTATCCAAATTTTCCACAACAAGCTAGCTTTTCAACTAATCATATGGAACCAGGTGCACATATAAGTGCAAAAGATAATGTTGTTAAGCATAATAAACAGGATTTTGAAGTTCCATTATTGAAAGATGATTTTAGAAACTTTTTGCCTGGAATGAAAATGCCATCAGCTTCAAAGCTACCATCTTTGAATCTCTTTAATCAACCTGTTTCTCTTAAAGGTCTTAAATCTGCTGGTGCTAAATTGGGACAAGATGTGCTTAGATGTAACAATGTTACTGAGATTGTTGCTGTTGATCATCATACTGGTCTACCACACCACTGCTCAAAGTTCTGA 2808 0.364 MSFSRNSTLRNGDSLEGMLNDYVVGKTKMKPQKNGSTKFVAALTCLQFFFAVYATFLLYYMGPSIDLRTKPDFTRIAQHWKQLMITPHTVGHYQESASSLIQEENNQFQPTIPSLVCENEKIDFLQKKSNDSQMIKIKRNLYEEIMDFQSKNIGTETLEELMKMKSKWDIKVPNHKKPKITVLLNHFKRKTLCSQLDSLLQQTLPFHHVWVLSFGSPNEASLKKIVESYNDTRISFISSSYDFKYYGRFQMALQTEADLVYIVDDDMIPGRKMLEILAHVAGTDKYKNSVLGSIGRILPFRQKDFTFPSYRKFKSKEAGLYLPDPAYDITIDKIVQVDFLSSSWFLSAELVKTLFIETPFTFSTGEDLHLSYQLQKYRNAGSFVLPVDPKDKETWGDSEHRLAYVSETTVIFKDVVQVRDDQWWKALSSGYITQWAAMNPQKIDALFYAHTVDEVKALSPLLEKFRTTVGKKAYIVVSGGTFCPCEHAAKALKWPFLVCKERRFKIFDLDIGAISSEVSNSEAPVIQAVYSSLKGLIKIHNPSVVIAVDDIDDNVRKALKMASETNSNGTALVLLPKPSVSKVLWMADLRSTALPNWNKMRLTISIITQNRVNSLSRLLKSLSNAYYLGDEVPITFNMDSKVDESTIKLVGSFNWPHGPKTLRRRIIQGGLIRAVSESWYPSSDNDFGLLLEDDIEVSPYYYLWIKYALMSYHYDPQVSLPELSSISLYTPRIVEVVKERPKWNATQFFKQIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTENAKENPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPQQASFSTNHMEPGAHISAKDNVVKHNKQDFEVPLLKDDFRNFLPGMKMPSASKLPSLNLFNQPVSLKGLKSAGAKLGQDVLRCNNVTEIVAVDHHTGLPHHCSKF 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03466 935 PANTHER - 27 935 - -
Car06g03466 935 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 158 388 IPR029044 -
Car06g03466 935 SUPERFAMILY Nucleotide-diphospho-sugar transferases 173 377 IPR029044 -
Car06g03466 935 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 602 850 IPR029044 -
Car06g03466 935 SUPERFAMILY Nucleotide-diphospho-sugar transferases 599 786 IPR029044 -
Car06g03466 935 CDD Glyco_tranf_GTA_type 190 281 - -
Car06g03466 935 PANTHER OSJNBA0004B13.7 PROTEIN 27 935 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03466 Car-Chr6 65082401 65087684 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03466 - - gmx:100790938 1654.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03466 06 65082401 65087684 Car06g03466 06 65082401 65087684 ECH