Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03460 ATGGCCGCCAAAGGTGGAACGACTCCGGCAACATACTCGCCGTGTCAGACAACCGGTAAAAACAAACCACCACTTTTTAAGGAAGATTGGATCCGACCCGATGCCCGCGGATTCCACCAGTGTAGACCCGCATTTTTCAGGACCGGTGCTGTGAATGCTGCATCAGGATCTGCATATGCTGAGTTTGGAAATACAAAGGTCATTGTGTCTGTTTTTGGGCCAAGAGAGAGCAAGAAGGCAATGATGTATAGTGATTCAGGGCGTCTGAATTGCAATGTCAGCTATACAACGTTTGCAACTCCGGTTCGTGGGCAGGGTTCAGACCACAAAGAGTACAGTTCGATGCTTCATAAAGCTTTGGAGGGTGCAATAATATTGGAAAGTTTCCCCAAGACCACTGTGGATGTCTTTGCATTGGTGCTGGAATCTAGTGGAAGTGATCTCCCAGTTGTCATATCATGTGCTAGTCTTGCCTTGGCAGATGCTGGAATACTGATGTATGACCTTGTTGCCTCAGTTTCTGTGTCATGTCTTGGTAAGAACCTCATCATTGATCCTATTTCGGAGGAGGAAAATTGCCAAGATGGAAGCATAATGATTACTTGCATGCCTTCTCGCTATGAAATCACCCAACTGACAGTTACCGGAGAATGGTCCACTCCAAAGATTAACGAGGGGATGCAGCTGTGTTTGGATGCTTGTGCGAAGCTTGCTAAGATTATGAGGACATGTTTGAAAGAATCCGCATCTGATGCACAGGATGATAGCTCTTAG 774 0.4638 MAAKGGTTPATYSPCQTTGKNKPPLFKEDWIRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDSGRLNCNVSYTTFATPVRGQGSDHKEYSSMLHKALEGAIILESFPKTTVDVFALVLESSGSDLPVVISCASLALADAGILMYDLVASVSVSCLGKNLIIDPISEEENCQDGSIMITCMPSRYEITQLTVTGEWSTPKINEGMQLCLDACAKLAKIMRTCLKESASDAQDDSS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03460 257 MobiDBLite consensus disorder prediction 1 24 - -
Car06g03460 257 Gene3D - 20 256 IPR027408 -
Car06g03460 257 SUPERFAMILY Ribonuclease PH domain 2-like 166 251 IPR036345 -
Car06g03460 257 CDD RNase_PH_MTR3 41 247 - -
Car06g03460 257 Pfam 3' exoribonuclease family, domain 1 40 164 IPR001247 -
Car06g03460 257 SUPERFAMILY Ribosomal protein S5 domain 2-like 28 195 IPR020568 -
Car06g03460 257 Pfam 3' exoribonuclease family, domain 2 168 228 IPR015847 -
Car06g03460 257 PANTHER EXOSOME COMPLEX COMPONENT MTR3 18 249 - -
Car06g03460 257 PANTHER EXOSOME COMPLEX COMPONENT 18 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03460 Car-Chr6 64993553 64996941 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03460 K12587 - gmx:100819105 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03460 06 64993553 64996941 Car06g03460 06 64993553 64996941 ECH