Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03425 ATGCAGATAGCAATGGCTTCTTCCCAAACTCTCGTTTCACCTTCACCACTCTCTTCTCAAACTCTTCTCCGATCATCCTTCTCCGGCGTATCTCTTAAGCTCTCTCCCCAATTTCCAACTCTTTCACCCTCAAATTTCAAGCCTCTCACTGTCGTTGCTGCTGCCAAGAAAGCCGTCGCCGTTCTAAAGGGTAACTCTGCTGTCGAAGGTGTCGTTACTCTCAGTCAAGAAGATGACGGTCCAACAACAGTTAATGTTCGCATCACTGGCCTTACTCCAGGGCTTCATGGTTTTCACCTTCATGAGTATGGTGATACTACAAATGGGTGTATCTCGACGGGAGCACATTTTAATCCTAAAAAATTGACTCATGGTGCTCCTGAGGATGAAATCCGTCATGCGGGTGACCTGGGAAACATAGTTGCTAATGCCGATGGCGTTGCAGAGACAACAATCGTTGACAATCAGATACCACTCACTGGCCCCAATTCAGTCGTTGGGAGAGCCTTAGTGGTTCATGAACTTCAAGATGACCTTGGAAAAGGTGGACATGAACTTAGTTTGACCACTGGAAATGCTGGTGGAAGATTAGCTTGTGGTGTGGTTGGCTTGACTCCAATATAA 624 0.4663 MQIAMASSQTLVSPSPLSSQTLLRSSFSGVSLKLSPQFPTLSPSNFKPLTVVAAAKKAVAVLKGNSAVEGVVTLSQEDDGPTTVNVRITGLTPGLHGFHLHEYGDTTNGCISTGAHFNPKKLTHGAPEDEIRHAGDLGNIVANADGVAETTIVDNQIPLTGPNSVVGRALVVHELQDDLGKGGHELSLTTGNAGGRLACGVVGLTPI 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03425 207 CDD Cu-Zn_Superoxide_Dismutase 64 199 IPR001424 GO:0006801|GO:0046872
Car06g03425 207 PANTHER SUPEROXIDE DISMUTASE CU-ZN -RELATED 55 205 IPR024134 -
Car06g03425 207 ProSitePatterns Copper/Zinc superoxide dismutase signature 2. 191 202 IPR018152 -
Car06g03425 207 PRINTS Cu-Zn-superoxide dismutase family signature 97 119 IPR001424 GO:0006801|GO:0046872
Car06g03425 207 PRINTS Cu-Zn-superoxide dismutase family signature 133 142 IPR001424 GO:0006801|GO:0046872
Car06g03425 207 PRINTS Cu-Zn-superoxide dismutase family signature 152 174 IPR001424 GO:0006801|GO:0046872
Car06g03425 207 PRINTS Cu-Zn-superoxide dismutase family signature 177 203 IPR001424 GO:0006801|GO:0046872
Car06g03425 207 ProSitePatterns Copper/Zinc superoxide dismutase signature 1. 97 107 IPR018152 -
Car06g03425 207 SUPERFAMILY Cu,Zn superoxide dismutase-like 57 204 IPR036423 GO:0006801|GO:0046872
Car06g03425 207 Pfam Copper/zinc superoxide dismutase (SODC) 68 202 IPR001424 GO:0006801|GO:0046872
Car06g03425 207 Gene3D Superoxide dismutase, copper/zinc binding domain 52 206 IPR036423 GO:0006801|GO:0046872
Car06g03425 207 PANTHER SUPEROXIDE DISMUTASE [CU-ZN] 55 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03425 Car-Chr6 64320940 64324981 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03425 K04565 - gmx:100815376 340.887