Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03422 ATGGCACTGTCACACACAATTTCAGCCTTAGCAACAACAACAACACTTTCTTCACCAAGAAACAAACCTCCAAAACCATTTCTCTTTTCTTCCTTCACAAAAAAGTCACAATTTTTGACAAAATCAACAAGACCCAGAAACAGAAGGAACTTTTCCGTAACGGTTAGAAGCGTTGCAGCACCACCCACAACAGCTGAACCCAACCAATCGTACCCAGAAGCTGAAAGGAACGAAATTGATGATGAATTTGGTGATGAGAGTTCGTCTTCGGAGTTTTCATGGAGGGATCATTGGTACCCAGTTTCGTTAATCGAAGATCTGAACCCTCGTTTGCCAACACCGTTTCAGCTTCTGGGTCGTGAAATTGTGATTTGGTTTGATAATTCCAATTCTCAATGGGTTGCTTTTGATGATAAATGTCCTCACCGTCTTGCCCCTTTATCTGAAGGAAGGATAGATGAAGGTGGAAATTTGCAGTGTTCTTATCATGGATGGTCTTTTGATGGCTGTGGAACTTGTGTTGTGATCCCTCAGGCTTCACCTGAAGGTCCCGAAGCGCGTGCTGTCCGGTCTCCTAGAGCATGTGCCACTAGGTTTCCTACCATTGTGTCTCAGGGTTTGCTCTTTGTTTGGCCTGATGAGAATGGTTGGGAGAAAGCAAATGCCTCTAAGCCTCCAATGTTGCCTGATGACTTTGGAAAACCAGAGTATGCCACGGTGAACATTCAGCGCGATCTGTTCTACGGCTACGATACTCTCATGGAGAATGTCTCTGATCCTTCTCACATTGATTTCGCTCATCACAAGGTTACAGGAAGGAGAGATAGAGCCAAGCCTATTCCATTCAAGATGGATTCGCGTGGTTCGTGGGGCTTCTCGGGAGCTAATGAAGGGAACCCGCGGATCAGTTCCAAATTTGTTGCACCATGTTATTATATAAACAAGGTTGAGATTGATACCAAACTCCCAATAGTTGGTGACCAGAAATGGGTTGTATGGATATGTTCCTTCAATGTCCCCATGGCACCCGGTAAGACTCGTTCCATTGTTTGCAGTGCTCGGAATTTTTTTCAGTTCACCGTGCCAGGGCCGGCCTGGTGGCAAGTTGTTCCTAGATGGTATGAACATTGGACTTCAAACAAGGTGTATGATGGAGACATGATTGTCCTTCAAGGTCAAGAGAAAGTTTTTCTCTCAGAAACCGAGCAAGGCGGCGACATTAACAAACAGTACACGAGCCTCACCTTCACACCAACACAGGCTGATCGTTTTGTGTTGGCGTTTAGAAATTGGCTGAGGCGACACGGAAATGGCCAGCCAGAATGGTTCAGCAAGAGCAGTCAGCCGTTGCCTTCAACCGTACTATCAAAACGTCAGATGTTGGATAGATTTGAACAGCACACACTAAAGTGCTCATCTTGTAAAGGAGCATACGAGGGATTCCAAACATGGCAGAAAATCCTAACTGGTGCAACAGTTGTGTTTTGCGCGACTTCTGGGATTCCATCGGATACTCAACTGCGCGTAGTTTTGGCTGGACTTGCGCTTGTCAGCGCAGCCTTAGCTTTTGCCATTAACCGACTGCAAAACAATTTTGTTTTCGTCGATTATGTGCACGCCGATATCGATTGA 1632 0.4565 MALSHTISALATTTTLSSPRNKPPKPFLFSSFTKKSQFLTKSTRPRNRRNFSVTVRSVAAPPTTAEPNQSYPEAERNEIDDEFGDESSSSEFSWRDHWYPVSLIEDLNPRLPTPFQLLGREIVIWFDNSNSQWVAFDDKCPHRLAPLSEGRIDEGGNLQCSYHGWSFDGCGTCVVIPQASPEGPEARAVRSPRACATRFPTIVSQGLLFVWPDENGWEKANASKPPMLPDDFGKPEYATVNIQRDLFYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPIPFKMDSRGSWGFSGANEGNPRISSKFVAPCYYINKVEIDTKLPIVGDQKWVVWICSFNVPMAPGKTRSIVCSARNFFQFTVPGPAWWQVVPRWYEHWTSNKVYDGDMIVLQGQEKVFLSETEQGGDINKQYTSLTFTPTQADRFVLAFRNWLRRHGNGQPEWFSKSSQPLPSTVLSKRQMLDRFEQHTLKCSSCKGAYEGFQTWQKILTGATVVFCATSGIPSDTQLRVVLAGLALVSAALAFAINRLQNNFVFVDYVHADID 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03422 543 MobiDBLite consensus disorder prediction 50 71 - -
Car06g03422 543 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 98 210 IPR017941 GO:0051537
Car06g03422 543 PANTHER PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC 30 543 - -
Car06g03422 543 SUPERFAMILY ISP domain 91 216 IPR036922 GO:0051537
Car06g03422 543 Pfam Pheophorbide a oxygenase 306 401 IPR013626 GO:0010277
Car06g03422 543 Pfam Rieske [2Fe-2S] domain 97 181 IPR017941 GO:0051537
Car06g03422 543 Gene3D - 236 439 - -
Car06g03422 543 CDD Rieske_RO_Alpha_PaO 86 221 - -
Car06g03422 543 Gene3D - 93 235 IPR036922 GO:0051537
Car06g03422 543 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 30 543 - -
Car06g03422 543 MobiDBLite consensus disorder prediction 50 74 - -
Car06g03422 543 SUPERFAMILY Bet v1-like 205 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03422 Car-Chr6 64291265 64295396 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03422 K13071 - gmx:100812162 949.503