Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03399 ATGGGTACCCTTCTTCCAACCTCAACTTCTGAAGTACATGAAAATTTAGAGAAGGCAAATAATTCGCTACAAATTGATCAACAACAAAAAGATGTTGATGCAGGTGCTCTTTTTGTCCTTAAATCAAAAGGTTCATGGCAGCACTGTGGTTACCACTTGACAACATCAATTGTGGCTCCAGCACTCCTAAGTCTTCCATATGCTTTCACATTACTAGGATGGACGGCTGGGATCTTTTGCTTAGTTATTGGAGCTCTTGTCACTTTCTATTCCTACAATTTATTGTCTCTTGTTCTTGAACGACAAGCTAAGTTGGGTAATCGTCAGCTACGATTTAGAGACATGGCTCGCGACATTTTAGGTCCTAGATGGGGTCGTTATTTTGTGGGCCCAATTCAATTTGCAGTATGCTATGGGGCTGTAGTGGCTAGTAATCTATTGGGAGGTCAATGCATTAAGGCAATTTATCTCCTATCAAATCCAAATGGGTCCATGAAGCTTTACGAATTTGTCATCATATTTGGTTGCTTCATGTTGATTTTAGCTCAAATCCCATCTTTCCACTCATTGAGACACATTAATCTTGTGTCTTTGGTTTTGTGCTTACTCTATAGTGCTTGTGCTGTTGTTGGTTCCATATATATTGGAAACTCATCAAAAGGACCAGAAAAGGATTATTCTCTTAAAGGTGATACAGAGAATAAATTATTTGGAATCTTCAATGCTCTTAGCATCATTGCCACCACTTATGGAAATGGAATTATTCCTGAAATTCAGGCTACATTAGCACCACCAGTAAAAGGGAAGATGTTCAAGGGACTAAGTGTTTGTTATGCTGCTGTTACTGTCACTTTCTTTAGCGTAGCTATATCTGGTTATTGGGCATTTGGCAACCAATCTGAAGGCCTTATCTTAAGCAACTTTGTGGACAATGGAAAACCATTAGTGCCTAAATGGTTTATTTATATGACCAACATTTTCACTATAGTACAGTTATCGGCAGTTGGTGTGGTGTACTTGCAACCTACAAATGAAGTGTTGGAACAAACATTTGGGGACCCAAAAAGTCCTCAATTCTCCAACCGCAATGTAATCCCAAGACTAATTTCTAGATCATTGGCTATAACTATTTCCACAATTATAGCAGCCATGCTTCCATTTTTTGGAGACATAAACTCACTTATTGGAGCTTTTGGATTCATGCCACTTGACTTTGTTTTGCCAGTAATTTTCTTCAATTTGACATTTAAGCCATCTAAAAGAAGCCCCATTTTCTGGCTTAATGTAACTATTGTTGTGGTTTTTTCAACACTGGGAGCTATTGCAACAATTGCAGCTGTTAGACAGATTGCCCTTGATGCCAAAAATTATCAACTATTTGCTAATGTATAA 1392 0.3815 MGTLLPTSTSEVHENLEKANNSLQIDQQQKDVDAGALFVLKSKGSWQHCGYHLTTSIVAPALLSLPYAFTLLGWTAGIFCLVIGALVTFYSYNLLSLVLERQAKLGNRQLRFRDMARDILGPRWGRYFVGPIQFAVCYGAVVASNLLGGQCIKAIYLLSNPNGSMKLYEFVIIFGCFMLILAQIPSFHSLRHINLVSLVLCLLYSACAVVGSIYIGNSSKGPEKDYSLKGDTENKLFGIFNALSIIATTYGNGIIPEIQATLAPPVKGKMFKGLSVCYAAVTVTFFSVAISGYWAFGNQSEGLILSNFVDNGKPLVPKWFIYMTNIFTIVQLSAVGVVYLQPTNEVLEQTFGDPKSPQFSNRNVIPRLISRSLAITISTIIAAMLPFFGDINSLIGAFGFMPLDFVLPVIFFNLTFKPSKRSPIFWLNVTIVVVFSTLGAIATIAAVRQIALDAKNYQLFANV 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03399 463 Pfam Transmembrane amino acid transporter protein 43 447 IPR013057 -
Car06g03399 463 PANTHER GABA TRANSPORTER 1 25 459 - -
Car06g03399 463 PANTHER OS05G0424000 PROTEIN-RELATED 25 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03399 Car-Chr6 63769608 63775963 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03399 135 463 Organic Solute Cotransporters AT1G08230 65.861 5.89e-155 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03399 - - gmx:100791114 774.237