Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03398 ATGGTTGAATCTGAACCCAAAGTTTTTATACCAGAGTCATTCCAAGTGAACTATGATATAGTTACTCAAATGAAGATGATTTGGGATGTGATGAAAGCACCATTGATTGTTCCTTTTTTGAATGCTTGTGTGTATATTTCACTAGCAATGGCACTCATGCTTTTCATGGAGAGAGTTTACATGGGAATAGTCATCGTCTTGATTAAACTCTTTTGGAAGAAACCAGAACAACGGTATAATTACGAGCCTCTTCGTGAAGATGAAGAACTCGGAAACTCGAATTTTCCCGTTGTTCTGATTCAAATTCCAATGTTTAATGAAAAAGAGGTTTACAAGGTTTCGATTGGAGCAGCTTGTGGGCTTTCATGGCCTTCGGATCGTCTCGTGATCCAAGTTCTTGATGATTCTACTGACCCTGTCGTCAAGCAATTGGTGGAAATGGAGTGCCAGAGATGGGCAAGTAAAGGACTAAATATAACGTACCAAATACGAGAAAGTAGAGGTGGATACAAAGCGGGTGCATTGAAAGAAGGATTAAAACGTAACTATGTGAAGCATTGTGAATATGTGGCAATTTTCGATGCTGATTTTCGTCCTGAACCTGATTTTCTCAGAAGAGCTATTCCTTTTCTTGTTGGAAATCCTGAACTTGCTCTTGTTCAAGCTCGTTGGAGATTTGTTAATTCGAATGAGTGTTTGTTGACAAGAATGCAAGAGATGTCCTTGGATTACCATTTCACAGTGGAACAAGAAGTTGGTTCAGCCACTCATGCTTTCTTTGGTTTCAATGGCACAGCAGGTGTTTGGAGAATTGCTGCAATCGACGAAGCAGGAGGGTGGAAAGACAGAACAACAGTTGAGGATATGGATCTTGCTGTTCGAGCAAGTCTTAGGGGATGGAAATTTTTGTACCTTGGAGACCTCGAGGCAAAAAGTGAGCTTCCAAGTACTTTGAGAGCCTTCAGATTCCAGCAACACAGATGGTCTTGTGGTCCTGCTAATCTGTTCCGCAAAATGGCGATGGACATTATTAGGAACAAGAAAGTGAAGTTTTGGAAGAAAGTGTATGTTATATACAGCTTTTTCCTTGTTCGTAAAATCGTAGCTCACATGGTCACTTTCTTCTTCTACTGTCTTGTTATTCCCCTCACAATTTTGGTTCCTGAGGTTTATGTTCCAATTTGGGGAGCTGTTTACATTCCTTCCGTCATCACCATTCTCAATTCAGTTGGAACACCAAGGTCTATTCACCTTTTGTTCTATTGGATCCTTTTTGAGAATGTCATGTCTTTGCACCGTACCAAAGCAACCCTCATTGGTTTGCTAGAATATGGAAGGGCTAATGAATGGGTTGTAACCGAAAAACTTGGAGATTCTGTCAACAACAAAACCAAATCTGGAGATGCTGCCAAGAAGACCAATGCCAAAGTTCAAAAGAAAACAAGATCCAAATTTGTTGAAAGGCTTAACTTTTTGGAGCTGGGATTTGCCGCATTTCTCTTCTTTTGTGGATGCTATGATTTTCAGCATGGAAAACACAACTATTTTATTTACCTCTTCCTTCAATCCTTGTCCTTCTCAATTGTAGGATTCGGTTATGTCGGCACCATAGTTTAA 1617 0.4014 MVESEPKVFIPESFQVNYDIVTQMKMIWDVMKAPLIVPFLNACVYISLAMALMLFMERVYMGIVIVLIKLFWKKPEQRYNYEPLREDEELGNSNFPVVLIQIPMFNEKEVYKVSIGAACGLSWPSDRLVIQVLDDSTDPVVKQLVEMECQRWASKGLNITYQIRESRGGYKAGALKEGLKRNYVKHCEYVAIFDADFRPEPDFLRRAIPFLVGNPELALVQARWRFVNSNECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIAAIDEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLEAKSELPSTLRAFRFQQHRWSCGPANLFRKMAMDIIRNKKVKFWKKVYVIYSFFLVRKIVAHMVTFFFYCLVIPLTILVPEVYVPIWGAVYIPSVITILNSVGTPRSIHLLFYWILFENVMSLHRTKATLIGLLEYGRANEWVVTEKLGDSVNNKTKSGDAAKKTNAKVQKKTRSKFVERLNFLELGFAAFLFFCGCYDFQHGKHNYFIYLFLQSLSFSIVGFGYVGTIV 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03398 538 Pfam Glycosyl transferase family group 2 189 381 IPR001173 -
Car06g03398 538 PANTHER BNAC09G36340D PROTEIN 5 538 - -
Car06g03398 538 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 86 315 IPR029044 -
Car06g03398 538 SUPERFAMILY Nucleotide-diphospho-sugar transferases 92 375 IPR029044 -
Car06g03398 538 PANTHER - 5 538 - -
Car06g03398 538 CDD CESA_CaSu_A2 96 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03398 Car-Chr6 63631724 63638047 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03398 5 538 Miscellaneous Gene Families AT5G22740 78.545 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03398 K13680 - gmx:100802752 983.4