Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03394 ATGCTTACCCTCACTCCGCCTTCTTCTGGTTCTCTTAACTATCGGAACCGGGTTCGACCTTCGCTGAACCGGGTTATTCCAACCAGAATAACTGTCAAATGCGGTTACGGATACGGTTTCGAATCGACAAATTTCGGCGTCGGTGGCTCTAGCCGAGCTGACTTTCAAAGCTCCTGCGCCATCTTAGCCAGTAAAGTCATTTCGCAAAAAGATGAATCTCACGCCGGTGGCGAAAACAATCATGCCGGCGCCGTCAACGGTCACAAAACCGCTGTGACGGATCTAGTCCACATCGGAAACGACAAACCTCTTCCTCCGAAGCCGCTCACTATCACTGACTTATCTCCTGCTCCGATGCACGGGTCGCAGCTACGCGTCGCGTATCAAGGCTGTCCCGGCGCGTACTCCGAAGCCGCCGCTGGAAAAGCATATCCAAACAGCGAAGCGATACCGTGCGATCAATTCGAAGTCGCGTTCCAATCGGTTGAACTCTGGATCGCCGATCGAGCAGTTTTACCGGTGGAAAATTCCCTCGGAGGTTCGATCCACCGAAACTATGATCTTCTCCTCCGTCACCGTCTCCACATCGTCGGAGAAGTTCAACTTCCGGTTCATCACTGCCTCCTCGCCCTCCCAGGGATCCGTAAAGAATACCTAACGCGCGTGATCTCACATCCACAAGCATTAGCACAGTGCGAACACACGCTTACAAAAATCGGGCTCAACGTAGCGCGTGAGGCCGTCGATGATACCGCCGGAGCAGCAGAATTCGTCGCAACAAACAATCTCCGCGACACAGCGGCAATCGCAAGCGCACGCGCTGCGGAGCTTTACGGTTTAAATGTTCTCGCTGATGGAATCCAAGATGACCCGAATAACGTGACCCGATTCGTTATGTTGGCCCGAGAACCCATAATTCCGCGAACGGATCGTCCATTTAAAACAAGCATAGTGTTCGCGCACGATAAAGGAACTTCGGTTTTATTTAAAGTGCTTTCCGCGTTTGCGTTTAGAAACATAAGCTTAACTAAGATTGAATCTAGGCCTCATCGTGGCCGTCCGATTCGCGTTGTTGATGATGAAAGTGAGGGAACAGCAAAACATTTTGAGTATATGTTTTATATTGATTTCGAGGCTTCTATGGCTGAGGTTAGAGCACAAAACGCACTTGCTGAGGTTCAAGAATTTACCTCTTTTTTGAGAGTATTGGGTAGCTATCCTATGGATATGACACCATGGAACCCTTCTTCTACTTCTCACCGTCAACATTAA 1272 0.4992 MLTLTPPSSGSLNYRNRVRPSLNRVIPTRITVKCGYGYGFESTNFGVGGSSRADFQSSCAILASKVISQKDESHAGGENNHAGAVNGHKTAVTDLVHIGNDKPLPPKPLTITDLSPAPMHGSQLRVAYQGCPGAYSEAAAGKAYPNSEAIPCDQFEVAFQSVELWIADRAVLPVENSLGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGIRKEYLTRVISHPQALAQCEHTLTKIGLNVAREAVDDTAGAAEFVATNNLRDTAAIASARAAELYGLNVLADGIQDDPNNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRGRPIRVVDDESEGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWNPSSTSHRQH 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03394 423 SUPERFAMILY ACT-like 297 409 IPR045865 -
Car06g03394 423 CDD PBP2_Ct-PDT_like 125 304 - -
Car06g03394 423 Gene3D - 309 410 - -
Car06g03394 423 ProSiteProfiles Prephenate dehydratase domain profile. 125 302 IPR001086 GO:0004664|GO:0009094
Car06g03394 423 PANTHER AROGENATE DEHYDRATASE 23 417 - -
Car06g03394 423 Gene3D - 205 291 - -
Car06g03394 423 Pfam Prephenate dehydratase 126 304 IPR001086 GO:0004664|GO:0009094
Car06g03394 423 ProSitePatterns Prephenate dehydratase signature 1. 278 300 IPR018528 GO:0004664|GO:0009094
Car06g03394 423 Gene3D - 126 298 - -
Car06g03394 423 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 23 417 - -
Car06g03394 423 SUPERFAMILY Periplasmic binding protein-like II 125 308 - -
Car06g03394 423 ProSitePatterns Prephenate dehydratase signature 2. 342 349 IPR018528 GO:0004664|GO:0009094
Car06g03394 423 ProSiteProfiles ACT domain profile. 316 407 IPR002912 -
Car06g03394 423 CDD ACT_CM-PDT 314 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03394 Car-Chr6 63498549 63500579 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03394 K05359 - gmx:100809331 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02205 01 47848424 47849710 Car06g03394 06 63498549 63500579 PCT