Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03391 ATGTTTTTAGTAGCAAAACCTTGTTGTTCCTTTCTACATGTTCCTCTCGATTATGATTTGAATTCCACAATCCGAAACGTCGTCGTTAGATGCAGTCGGAGCAGCGTTCAGAATGTTGAATTATTGAAAGTAGCGAAGAGGGTGGTGCTTGTTAGGCACGGACAGAGCACGTGGAACGCCGAAGGGAGAATCCAAGGCAGTTCTGATTTCTCCGTTCTTACTAATAAAGGAGAGTCTCAGGCAGAGACTTCACGCCAAATGCTCATCAACGACAATTTCGATGTTTGTTTCGCGAGTCCTTTGGCACGATCTAAGAGAACAGCTGAAATCATTTGGGGACCTCGCCAACAACTCATTATTCCCGAGTTCAATTTAAGGGAAATAGATTTGTACTCCTTTCAAGGTCTGTTGAAGCATGAGGGAAAAGCGAGATTTGGTTCTTCTTATCAACAATGGCAGGTTGATGCCGCAAATTTCGTCATTGACGGTCATTATCCCGTGAGAGAGCTGTGGGATCGCGCTAGGAGCTGCTGGACTAAAATCCTAGATCATGATAGCAGGTCTGTTCTTGTGGTTGCTCACAATGCTGTTAATCAGGCTCTTATTTCCACAGCAATTGGTTTAGGGGAAGAGTACTTCAGAACTTTACTTCAGAGCAATTGTGGTGTAAGTGTGCTGGATTTCACCCCGAGATCGGATGGTGTCTCTCCCCTTATTTCCCTCAACCGCTTAAACCAGACGCCTGGTTCACCTGTTGCTGGAGGGAAATCTGGAGGTAGAGAAGCAAGTAAGCGGATCATACTCGTTTGTAACGGATCTACTCAGGGAAATACAGAGGATGGTTTTCTTTTTGTCGGTGATCAGCCGTTGAACATGCTTGGCGTTATACAGGTATTGACCAGTTTATCAGAAATAAGTCGGCAGAAGTTATCTCATCTGACTGAACTTTTGCATGTATAA 960 0.4448 MFLVAKPCCSFLHVPLDYDLNSTIRNVVVRCSRSSVQNVELLKVAKRVVLVRHGQSTWNAEGRIQGSSDFSVLTNKGESQAETSRQMLINDNFDVCFASPLARSKRTAEIIWGPRQQLIIPEFNLREIDLYSFQGLLKHEGKARFGSSYQQWQVDAANFVIDGHYPVRELWDRARSCWTKILDHDSRSVLVVAHNAVNQALISTAIGLGEEYFRTLLQSNCGVSVLDFTPRSDGVSPLISLNRLNQTPGSPVAGGKSGGREASKRIILVCNGSTQGNTEDGFLFVGDQPLNMLGVIQVLTSLSEISRQKLSHLTELLHV 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03391 319 Pfam Histidine phosphatase superfamily (branch 1) 48 231 IPR013078 -
Car06g03391 319 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 36 231 - -
Car06g03391 319 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 36 231 - -
Car06g03391 319 CDD HP_PGM_like 47 235 IPR013078 -
Car06g03391 319 SUPERFAMILY Phosphoglycerate mutase-like 46 242 IPR029033 -
Car06g03391 319 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 50 59 IPR001345 GO:0003824
Car06g03391 319 Gene3D - 46 249 IPR029033 -
Car06g03391 319 SMART PGAM_5 47 201 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03391 Car-Chr6 63451328 63455929 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03391 K22200 - gmx:100794084 465.307