LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car06g03368	ATGCATAAATCTTCTGAACAAAAAGATGGATCTGAATCAGAAACTCCAAATTGCTTCGATTCGTTCACTCATTTAGCTTCAACAAAACCTATTTGTTCACACAAGAACACTTTTCCTATGAAACGCACCGTtcgtcctctcttcgttcttctacttgttctcgttttcgtCGCCACGCTCACTTCACGCGCCATTCTTCGTAGAAGCTTACTCTCAGTTGAGCTCGAAACGCGCGTTTTAACGCGCGATTTATCGCCGTTAAACGCCACACTCCTCCAACACGCCGCAGTCGAGATCGGCGAGGAGAAATCCCGGAAAGAGATCCAGCAGCTTCTCGACGGTAATTTCGCTAGCCAAGCGCGGCATCGAACATTCGTCTCCTGGCGAAGGTTCATCCATCATGATTCCGATAGGAACCTTCCGGCGACATTAAGGTCGCCGCTTTTTTATCGGTATTGGCTTGATTTCCGGCGAGTTTTGCATGATTGGGCGAGGAAACGTCGGTTTCAACCCGGAATCATGGGCGAGTTAACTCGGTCGGTTAAGGTTCCGCTGGATCGGTTCAACAAAGTGGTTGATGTTGCTGCTGCTGCAAAATCTGGTGATAAGAAGTATTCATCATGTGCTGTTGTTGGGAACAGTGGAATTTTGCTTAATAGAAACTATGGTTCTTTAATTGATGCACATGAGTTTGTTATAAGGTTAAACAATGCTAGGGTTGATAACTATGAAAACAAAGTTGGGAAAAAAACAAGTATTTCATTTGTGAATAGCAACATTTTGCATTTGTGTGCAAGAAGAGCAGGGTGTTTTTGTCACCCATATGGTCCTAATGTTCCTATTGTTATGTACATTTGTCAAGCAGTGCATTTCTTGGATTACACTGTTTGTAATGGTTCACACAAAGCACCTTTGTTGGTTACTGATCCTAGGTTCGATGTGTTGTGTTCTAGGATTGTGAAGTATTACTCATTGAAGAGATTTGTGGAGGAAACAGGTAAAGGTTTGGAACAATGGAGTTCAGCTCATGATGGTGCTTTGTTTCATTATTCTTCCGGTATGCAAGCTGTGATGTTGGCTTTAGGGATATGTGATAAAGTTAGTATTTTTGGGTTTGGTAAATCACCTTTGGCTAAACATCATTATCATACTAATCAGAAATCTGAACTTCATTTGCATGATTATGAGGCTGAATATGCTTTTTATCGTGACCTTGTTGATGGACATAAGGCTATACCGTTTGTATCAGACAAGTTTAAGATTCCTCCTGTTGTCATGTATCGATGA	1287	0.4048	MHKSSEQKDGSESETPNCFDSFTHLASTKPICSHKNTFPMKRTVRPLFVLLLVLVFVATLTSRAILRRSLLSVELETRVLTRDLSPLNATLLQHAAVEIGEEKSRKEIQQLLDGNFASQARHRTFVSWRRFIHHDSDRNLPATLRSPLFYRYWLDFRRVLHDWARKRRFQPGIMGELTRSVKVPLDRFNKVVDVAAAAKSGDKKYSSCAVVGNSGILLNRNYGSLIDAHEFVIRLNNARVDNYENKVGKKTSISFVNSNILHLCARRAGCFCHPYGPNVPIVMYICQAVHFLDYTVCNGSHKAPLLVTDPRFDVLCSRIVKYYSLKRFVEETGKGLEQWSSAHDGALFHYSSGMQAVMLALGICDKVSIFGFGKSPLAKHHYHTNQKSELHLHDYEAEYAFYRDLVDGHKAIPFVSDKFKIPPVVMYR	428

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car06g03368	428	Pfam	Glycosyltransferase family 29 (sialyltransferase)	183	407	IPR001675	GO:0006486\|GO:0008373
	Car06g03368	428	Gene3D	Glycosyl transferase family 29	102	412	IPR038578	-
	Car06g03368	428	PANTHER	BETA-1,6-GALACTOSYLTRANSFERASE GALT29A	39	428	-	-
	Car06g03368	428	PANTHER	BETA-1,6-GALACTOSYLTRANSFERASE GALT29A	39	428	-	-
	Car06g03368	428	PIRSF	Sialyl_trans	315	418	IPR012163	GO:0006486\|GO:0008373
	Car06g03368	428	PIRSF	Sialyl_trans	39	284	IPR012163	GO:0006486\|GO:0008373

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Car06g03368	203	376	Glycosyltransferase	AT3G48820	24.138	5.88e-09	55.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car06g03368	K00786		-	gmx:100789506	654.44