Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03367 ATGATGATTTCTTTGATGGGTCGTCTTAATCGGACACATCAATATTGGAAAAAAACCATTGAAAAGCATGGGGGAAAGGTGGCAAACTCTATTATTGGTGCAACTTGTTTGGTGGCTTCACCTGCTGAGCGAGAACGTGGTGGAACATCCAAACTTGCAGAAGCCATGGAAAAGGGCATACCTGTGGTTAGGGAGGCTTGGTTAACAGACAGCATTGAAAAGCAAGAACCGCAACCTTTGGAAGCTTATGATCTTGTATCTGATCTTTCTGTGGCTGGCAAGGGAATCCCTTGGGACAAACAAGATCCTGGGGAGGAGGCTATTGAATCACTCTCAGCAGAACTCAAGCTTTATGGGAAGAGAGGGATCTACAAAGATACCAAATTGCAGGAGCAAGATGGAAAGATATTTGAAAAAGATGGGATACTGTACAACTGTGCCTTCTCTGTTTGTGACCAAGGGAGAAGACTTAATGACTATTGTGTCATGCAACTGATTACCCAAGAGAATCGTTTGCATATGTATTTCAAGAAAGGAAGAGTGGGGGATGATCCAAATGCAGAGGAGCGATTAGAAGAATTTGAGAACGTGGACAATGCTATCAAAGAGTTTGTGAGGCTCTTTGAGGAAATAACAGGAAATGAGTTTGAATCATGGGAAAGAGAGAAGAAGTTTCAGAAGAAGCCATTGAAATTTTACCCTATTGACATGGATGATGGAGTTGAAGTTAGACACGGCGCGCTAGGTCTTCGGCAGCTGGGGATAGCAGTGACACACTGTAAGCTTGAGCCTCAAGTTGCAAATTTTATGAAGATTTTGTGTAGCCAAGAGATCTATAAGTATGCATTGATGGAGATGGGTTATGACTCTCCAGACCTTCCAATAGGAATGGTTACAGATCTTCACCTGAAAAGATGTGAGGAAGTTCTATTGGAATTCATAGAGAAAGTGAAATCATTGAAAGAGACAGGGCCTAAGACTGATGCTATTTGGTCTGATTTTAGCCAGAGATGGTTCACTTTGATGCACTCCACAAGACCTTTTATTTTTAGAGATTATCAAGAAATTGCAGATCATGCTGCTGCAGCTCTTGAGGGTGTTAGAGATATAACCCTTGCTTCTCACCTCATAGGAGATATGAGTGGCTCTACTATTGATGATCCATTATCAGACACATATAAGAAATTGGGTTGCTCAATTTCTCCCCTGGAGAAAGATTCAAATGATTATGAGATGATTGTGAAATACCTCGAAAAAACTTACGAACCTGTCAAAGTTGGTGACATTGAATATGGGGTGTCAGTTGAAAACATCTTCACTGTAGAATCTAGTGCTTGCCCTTCTTATGAAGACATAGTAAAGCTGCCAAACAAGGTTCTGCTATGGTGTGGATCAAGAAGCTCAAATCTTTTGAGGCACTTACACAAGGGGTTCTTGCCAGCTATATGTTCACTACCGGTTCCAGGTTACATGTTTGGCAAAGCCATTGTTTGCTCCGATGCTGCAGCAGAGGCTGCAAGATATGGTTTTACTGCTGTGGACAGACCAGAAGGGTTCTTGGTTTTGGCCATTGCTTCACTAGGAAATGAGATTACCGAGTTGAAAAGCCCACCAGAGGATACAACATCTTTGGAGGATAAGAAGAATGGAGTGAAGGGGCTTGGAAAGAAGAAAACAGATGAATCAGAGCATTTTGTTTGGAAAGATGACATAAAAGTTCCTTGTGGTCGAATAATTGCATCAGAAGATGAAGATAGCCCCTTGGAATACAATGAGTATGCTGTTTATGATCCTAAGCAGGTACGCATAAGCTATTTGGTGGGGGTGAAGTATGAAGAGAAGGACACGGTGATTGACACGGCAGAGTGA 1869 0.42 MMISLMGRLNRTHQYWKKTIEKHGGKVANSIIGATCLVASPAERERGGTSKLAEAMEKGIPVVREAWLTDSIEKQEPQPLEAYDLVSDLSVAGKGIPWDKQDPGEEAIESLSAELKLYGKRGIYKDTKLQEQDGKIFEKDGILYNCAFSVCDQGRRLNDYCVMQLITQENRLHMYFKKGRVGDDPNAEERLEEFENVDNAIKEFVRLFEEITGNEFESWEREKKFQKKPLKFYPIDMDDGVEVRHGALGLRQLGIAVTHCKLEPQVANFMKILCSQEIYKYALMEMGYDSPDLPIGMVTDLHLKRCEEVLLEFIEKVKSLKETGPKTDAIWSDFSQRWFTLMHSTRPFIFRDYQEIADHAAAALEGVRDITLASHLIGDMSGSTIDDPLSDTYKKLGCSISPLEKDSNDYEMIVKYLEKTYEPVKVGDIEYGVSVENIFTVESSACPSYEDIVKLPNKVLLWCGSRSSNLLRHLHKGFLPAICSLPVPGYMFGKAIVCSDAAAEAARYGFTAVDRPEGFLVLAIASLGNEITELKSPPEDTTSLEDKKNGVKGLGKKKTDESEHFVWKDDIKVPCGRIIASEDEDSPLEYNEYAVYDPKQVRISYLVGVKYEEKDTVIDTAE 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03367 622 ProSiteProfiles BRCT domain profile. 1 85 IPR001357 -
Car06g03367 622 Pfam WGR domain 144 221 IPR008893 -
Car06g03367 622 Coils Coil 303 323 - -
Car06g03367 622 MobiDBLite consensus disorder prediction 539 556 - -
Car06g03367 622 Gene3D - 255 396 IPR036616 GO:0003950
Car06g03367 622 SMART WGR_cls 144 226 IPR008893 -
Car06g03367 622 PANTHER POLY [ADP-RIBOSE] POLYMERASE 1 614 - -
Car06g03367 622 CDD WGR_PARP1_like 134 239 - -
Car06g03367 622 Pfam BRCA1 C Terminus (BRCT) domain 10 72 IPR001357 -
Car06g03367 622 ProSiteProfiles PARP alpha-helical domain profile. 259 378 IPR004102 GO:0003950
Car06g03367 622 SUPERFAMILY ADP-ribosylation 396 614 - -
Car06g03367 622 CDD parp_like 259 610 - -
Car06g03367 622 Gene3D BRCT domain 1 92 IPR036420 -
Car06g03367 622 Pfam Poly(ADP-ribose) polymerase catalytic domain 407 610 IPR012317 GO:0003950
Car06g03367 622 CDD BRCT_PARP1 1 73 - -
Car06g03367 622 Pfam Poly(ADP-ribose) polymerase, regulatory domain 260 393 IPR004102 GO:0003950
Car06g03367 622 SUPERFAMILY BRCT domain 3 97 IPR036420 -
Car06g03367 622 MobiDBLite consensus disorder prediction 535 556 - -
Car06g03367 622 SUPERFAMILY WGR domain-like 109 237 IPR036930 -
Car06g03367 622 Gene3D - 397 613 - -
Car06g03367 622 PANTHER DNA LIGASE 1 614 - -
Car06g03367 622 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 259 395 IPR036616 GO:0003950
Car06g03367 622 SMART BRCT_7 1 75 IPR001357 -
Car06g03367 622 ProSiteProfiles WGR domain profile. 133 232 IPR008893 -
Car06g03367 622 ProSiteProfiles PARP catalytic domain profile. 387 618 IPR012317 GO:0003950
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03367 Car-Chr6 63049805 63054340 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03367 K10798 - gmx:100788978 1141.72