Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03358 ATGATATCACTAATTATGTCAAACTCTTCCTTCTTCAAATTCCTTCTTTTCTTTCTTCTCACCATTTCAGCTTCATTTGTTCAAATCCAAGGCCTATGTTTTGGAATAAACTATGGACAAATAGCCAACAATTTACCTTCACCATCAAGAGTAGCTATTCTTATAAAGTCAATGAATGTAACAAGAATCAAATTATATGATGCTGATCCAAATGTTCTACATGCTTTCTCCAAATCAAATGTTGAATTTGTCATAGGACTTGGAAATGAAGATCTTCAAAATATGACTGACCCTTCTAAAGCTCAAACATGGATTCAAAATCATGTTCTACCTTACCTTTCACAAACAAAAATAAATTGCATAACTATAGGAAATGAAGTGTTCAATACCAATGATACTCAATTAATGTTGAACCTTTTACCTTCAATGCAAAATGTCTACAATGCCCTTGTTAATCTTGGATTAGACCAAGAAATTAGTGTCACAACTCCTCATTCTTTCAACATTTTGTCAAATTCTTACCCTCCTTCATTAGGTTCTTTTAGACAAGATCTTATGCAATATATTCAACCACTTGTTGAATTTATATCTCAAATAAATTCATCCTTTTTTATTAATGCTTACCCTTTTTTTGCATACAAAGATAACCCTAGTGAGGTTAATTTAAACTATGTACTATTTGAACCAAATCAAGGTTTGGTTGATCCAAATACAAATTTACATTATGATAACATGTTGTATGCACAAATAGATGCTGTATATGCTGCAATTAAATTATTGGGCTATTTTAATATTGAAGTTAGGATTTCTGAGACAGGTTGGCCTTCAAAGGGTGACACTAATGAATTTGGAGCTACAATACAAAATGCAAAATTGTATAATGGAAATTTGCTTAGAAGAATTGAGGAAAAACAAGGGACACCTGGAAAACCTTTGGTTCCAATTGATGTATATGTTTTTGCACTTTTTAATGAAGATTTGAAGCCTGGTCCTACTTCTGAAAGAAACTATGGTCTTTATTATCCTGATGGTAGCCCTGTTTATAACATTGGATTGCAAGGTTATCTACCACAAATGGTTATTCCATCCAAATCTAATGTTTTGTCATTCAATTTTCTTGTATGTATAGTTACATACTTGATTTTGCTTGGGAGCTTTTAG 1161 0.317 MISLIMSNSSFFKFLLFFLLTISASFVQIQGLCFGINYGQIANNLPSPSRVAILIKSMNVTRIKLYDADPNVLHAFSKSNVEFVIGLGNEDLQNMTDPSKAQTWIQNHVLPYLSQTKINCITIGNEVFNTNDTQLMLNLLPSMQNVYNALVNLGLDQEISVTTPHSFNILSNSYPPSLGSFRQDLMQYIQPLVEFISQINSSFFINAYPFFAYKDNPSEVNLNYVLFEPNQGLVDPNTNLHYDNMLYAQIDAVYAAIKLLGYFNIEVRISETGWPSKGDTNEFGATIQNAKLYNGNLLRRIEEKQGTPGKPLVPIDVYVFALFNEDLKPGPTSERNYGLYYPDGSPVYNIGLQGYLPQMVIPSKSNVLSFNFLVCIVTYLILLGSF 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03358 386 Pfam Glycosyl hydrolases family 17 35 350 IPR000490 GO:0004553|GO:0005975
Car06g03358 386 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 14 14 366 - -
Car06g03358 386 Gene3D Glycosidases 33 356 - -
Car06g03358 386 SUPERFAMILY (Trans)glycosidases 34 350 IPR017853 -
Car06g03358 386 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 14 366 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03358 Car-Chr6 62923227 62924913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03358 84 377 Glycoside Hydrolase AT2G27500 64.407 2.70e-145 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03358 - - ccaj:109798347 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02572 01 51423954 51429519 Car06g03358 06 62923227 62924913 PCT