Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03338 ATGGCTATGACGCCAAGAAAAACTCGCAACCGTGAAATGCTCTTCGACTCCGTCATCGCTCTCGTATTCATCCTCGTCGCCTGTGTCGACCTCTGCGACGGCGCCACCGTTGTCGACGTCTACCGTCTAATCCAATACGATATGTCAGGTGTTCCATTCGGATCTCGACTCGCTAGCCTCAATCACCACGCCGCTTCTCTCCATTTCTCTCCTCATGCTGATCTATCTCGCACCGTTCTCCTCATACCTCTTCGCGAACTCAATATGTCCTTTGTTCAAGAATATATTGCTGCTAGCAAGCCTCTGGGGGGTTTAATTTTGTTGCTGCCCCAGATGTTCAGTGTTGAAAACAAAGGTGGTGTGGGAAGTAATCATGATGATGGGAGCAAAGAACTACTGAAGAATGTGCTGGATGAGGTTGAACAAATACTTATACACACCAACTTACCTTATCCTGTTTATTTTGCTTTTGAGGATGAGAACATTGACACCGTGTTATTGGATATCAAGAAGAATGACGCCACTGGTCAGCCTGCTACTGCAACTACTGGCGGGTACAAATTTGTCGTTTCAGCCACTGAACCAAAGAAAGTTGGATCTCCACCCATTACAAATATTCAGGGATGGTTGGCAGGGCTGAAGACAGATGGTGATTCTCATCAATTACCCACCATTGCAATAGTGGCATCATATGACACCTTTGGGGCTGCTCCGGCATTATCAGTGGGAAGCGATAGTAATGGAAGTGGCATTGTGGCTCTCCTTGAAGTAGCTAGATTGTTTTCTCTTTTATATTCTAATCCAAAAACAAGAGGACAATATAATCTGCTGTTTGGGCTAACTTCTGGTGGGCCTTACAACTACAATGGAACCCGTAAGTGGCTCCAGAGCTTTGACCAACGTCTGCGTGAGAGCATTGACTATGCTATTTGCTTAGATAGTATTGGCTCATGGGAAAATGAACTATGGATTCATGTATCTAAGCCTCCAGAAAATGCCTTTATTAAGCAAATTATGGAAGATTTTTCAAGTGTTGCAGAAGAGTTAGGTTTCCAAGTTAATCTGAAGCATAAGAAAATAAACATTTCAAATCCTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGCTGAGAGTTACTGCTGCCACCCTTTCTGAGCTTTCTACGCCACCTGAATTGCTAGAGAGGACTGGTGGTTTGGTTGATGGCAGGCAATTTGTCAATGAAGCGGCAATTGTAAGAAGTGTGAAACTAATTGCTGAGTCTCTTGCGAAGCATATTTATGGACATCAAGGAAAGAACGTACAGATCTTTGCGGACAACAGTAACTTGGCTGTAAATCCTTCTTATGTTCGATCATGGTTAGATGTTTTGTCCCGAACACCTCGAGTAGCACCATTTTTATCAAAAGACGACCCTTTTGTTACGGCATTGAAAAAGGAATTAGAAGATCATACTGATGAAGTCAATCTGCAACGAGAAGTACTAGATGGGATGTTCACTTTCTATGATTCAACTACGGCAAAGCTGAACATATATCAGGTTGCCAGTGTCACATTTGACTTGCTGTTGCTTCTAGTGTTGGGATCATATTTGATTGTGCTCTTTAGTTTCTTGGTCATCACTACCAGGGGTCTAGATGATCTAATCAGTTTATTCCGGCGGCCTCCTTCTCGAAAAGTGAAAACTGCTTAA 1695 0.433 MAMTPRKTRNREMLFDSVIALVFILVACVDLCDGATVVDVYRLIQYDMSGVPFGSRLASLNHHAASLHFSPHADLSRTVLLIPLRELNMSFVQEYIAASKPLGGLILLLPQMFSVENKGGVGSNHDDGSKELLKNVLDEVEQILIHTNLPYPVYFAFEDENIDTVLLDIKKNDATGQPATATTGGYKFVVSATEPKKVGSPPITNIQGWLAGLKTDGDSHQLPTIAIVASYDTFGAAPALSVGSDSNGSGIVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLQSFDQRLRESIDYAICLDSIGSWENELWIHVSKPPENAFIKQIMEDFSSVAEELGFQVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSTPPELLERTGGLVDGRQFVNEAAIVRSVKLIAESLAKHIYGHQGKNVQIFADNSNLAVNPSYVRSWLDVLSRTPRVAPFLSKDDPFVTALKKELEDHTDEVNLQREVLDGMFTFYDSTTAKLNIYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISLFRRPPSRKVKTA 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03338 564 Pfam Nicastrin 225 362 - -
Car06g03338 564 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Car06g03338 564 CDD M28_nicalin_like 137 430 - -
Car06g03338 564 Gene3D Zn peptidases 152 425 - -
Car06g03338 564 ProSitePatterns EF-hand calcium-binding domain. 245 257 IPR018247 -
Car06g03338 564 PANTHER NICALIN 7 563 - -
Car06g03338 564 SUPERFAMILY Zn-dependent exopeptidases 191 390 - -
Car06g03338 564 PANTHER NICALIN 7 563 IPR016574 GO:0009966|GO:0016020
Car06g03338 564 PIRSF Nicalin 2 559 IPR016574 GO:0009966|GO:0016020
Car06g03338 564 Coils Coil 475 495 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03338 7 562 EF-hand Containing Proteins AT3G44330 74.821 0.0 859
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03338 - - mtr:MTR_4g052530 1026.16