Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03313 ATGAGAAAGCAAAACGAACAACGGGTTGTTATCCTAGGAGGCGGTGTTGCCGGTTCCCTCGTCGCTAAATCTCTTCAATTTCATTCCCATGTCACACTCATTGATCCGAAGGAATACTTTGAGATTCCATGGGCAAACTTGAGGACAATGGTGGAGCCATCCTTTGGAGAAAGGATATTGATCAACCATAGAGAGTACTTCACAAAAGGTGACCTTGTTGTATCTAGTGCTGTCAATGTGACGGAAACTGAAGTGTTGACTGCAGACGGCCATCAGATTGTGTACGACTATCTTGTAATTGCCACTGGACATGCAGATCCTGTACCCAAAATTAGGACCGATAGACTTCATCAGTATAAAGAAGAAAATCAAAAGATAAAATCTGCTCGTTCCATTCTGATTATTGGAGGAGGTCCTACTGGTGTGGAACTTGCCGGAGAGATAGCTGTTGATTTTCCAGATAAGAAGGTTACACTAGTGCACAAAGGACCAAGGCTTCTGGAATTCATAGGGGCAAAAGCCGGTGATAAGACTCTAAAATGGTTGAAATCTAAGAATGTTGAGGTGAAACTAGAGCAAGCGGTCGACTTAAAAAGTGCTGCAGATGGACACAAGGTATATCGAACTTCAGTTGGGGATACCATTGAAGCAGATTGTCATTTCTTATGCACGGGGAAACCACTTGCTTCGGCATGGCTTAAGGAAACTGTGTTGAGGAATGACTTGGATGTTCATGGAAGGATTAAGGTAGATGAAAACTTGAGAGTCAAGGGCCGGAACAACATTTTTGCAATTGGAGATATTACAAATATTCCTGAAATCAAGCAAGGGTTTTTGGCACAGAAGCAGGCGGAAGTGGTTGTGAAGAACTTGCGACTGATGATCGAGGGAGGAAGAGAATGTTGGAGGGAAACTTACAAGCCACATTCAGTAATGGCAATAGTTTCACTTGGGAGGTATGATGCAGTCGCGCAGTTCCCGTTGCTGACAATCGGTGGAAGAATTCCTGGCTTCATCAAGTCTGGAGATTTGTTTGTTGGTAAAACAAGAAAACTAATGGGGCTAAACCCTCATACTGAATAA 1083 0.4321 MRKQNEQRVVILGGGVAGSLVAKSLQFHSHVTLIDPKEYFEIPWANLRTMVEPSFGERILINHREYFTKGDLVVSSAVNVTETEVLTADGHQIVYDYLVIATGHADPVPKIRTDRLHQYKEENQKIKSARSILIIGGGPTGVELAGEIAVDFPDKKVTLVHKGPRLLEFIGAKAGDKTLKWLKSKNVEVKLEQAVDLKSAADGHKVYRTSVGDTIEADCHFLCTGKPLASAWLKETVLRNDLDVHGRIKVDENLRVKGRNNIFAIGDITNIPEIKQGFLAQKQAEVVVKNLRLMIEGGRECWRETYKPHSVMAIVSLGRYDAVAQFPLLTIGGRIPGFIKSGDLFVGKTRKLMGLNPHTE 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03313 360 Gene3D - 5 345 - -
Car06g03313 360 SUPERFAMILY FAD/NAD(P)-binding domain 3 272 IPR036188 -
Car06g03313 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 9 28 - -
Car06g03313 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 95 113 - -
Car06g03313 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 131 149 - -
Car06g03313 360 PRINTS FAD-dependent pyridine nucleotide reductase signature 247 269 - -
Car06g03313 360 PANTHER APOPTOSIS-INDUCING FACTOR 1 7 358 - -
Car06g03313 360 PANTHER NADH:UBIQUINONE REDUCTASE (NON-ELECTROGENIC)-RELATED 7 358 - -
Car06g03313 360 Pfam Pyridine nucleotide-disulphide oxidoreductase 8 273 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03313 Car-Chr6 62177439 62181172 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03313 K22745 - gmx:100813439 590.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03313 06 62177439 62181172 Car06g03313 06 62177439 62181172 ECH