Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03296 ATGGAGTTTCATTctcttcccaaactctactttcttctctccttcaccatcctcttcctttcatctttcctcgttcAAGCTCAAATTACTTTCAAATACTGCGATAAGAAGGCAGACTATGCTGTGAAGGTAACTGGAATTGAAATATTACCAAACCCTGTGGTTAGTGGCGATCCAGCTAACTTTAAGATCTCAGCTACTTCTGGAAAAGCTATTTCTGGTGGAAAGGTGGTAATTTCAGTTTCCTATGTTGGGGTGCCTGTCCATTCTGAAACCATTGATCTTTGTAAGGAAGTATCTTGTCCCGTTGCAAATGGCAATTTCTTGATTTCTCACACCCAAACACTGCCTTCAATTACTCCACCGGGACCTTATTCTCTGAAGATGACATTGAAGAATGACAACGGCGAGCTGTTAACTTGCATCAAGTTTAATTTCAAAATTGTTTTCGGTTCTTTTTTGTCTGACATGTGA 474 0.3418 MEFHSLPKLYFLLSFTILFLSSFLVQAQITFKYCDKKADYAVKVTGIEILPNPVVSGDPANFKISATSGKAISGGKVVISVSYVGVPVHSETIDLCKEVSCPVANGNFLISHTQTLPSITPPGPYSLKMTLKNDNGELLTCIKFNFKIVFGSFLSDM 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03296 157 PANTHER LEGUMINOSIN GROUP578 SECRETED PEPTIDE 5 156 - -
Car06g03296 157 SUPERFAMILY E set domains 28 149 IPR014756 -
Car06g03296 157 PANTHER NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED 5 156 IPR039670 -
Car06g03296 157 CDD PG-PI_TP 31 146 IPR033917 GO:0032366
Car06g03296 157 SMART pgtp_13 31 146 IPR003172 -
Car06g03296 157 Gene3D - 27 151 - -
Car06g03296 157 Pfam ML domain 29 148 IPR003172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03296 Car-Chr6 61711956 61717797 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03296 - - gmx:100500637 233.417