Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03293 ATGCTTCACGCTTTCGTTTTCTCTCTTTCAAACAAGATGTCTCTTGCTCGAGGCACTGCTGTTGTTTTCCTCTTATTTGCTCTATACTGCGGTTTGGACCCATTTGAACACAGTCCAATTGCGAAATTTCCTGATTTTGAGGCCAAGAAGGTTGACATACCACCATGGTCTGAGGTTCCTAATGACACTGACAAACAAAACTTGCTGCAGAATTCTGAGATTAAGTTTTTGAACCAAGTTCAAGGACCTGAGAGTATTGTTTTTGATCCTCTTGGTCGTGGTCCTTATACTGGTCTTGCTGATGGTAGGATCTTGTTTTGGAATGGACAATCTTGGTTTGATTTTGCTTACACCTCGCCCAATAGGTCACTATGCACTCCCATTGAAGCTGCAACACCATTTAGTTATGTGAAGACTGAACACATCTGTGGAAGGCCTTTAGGACTCAGATTTGACAAGAAAACTGGTGAATTGTACATAGCAGATGCATATCTTGGGCTCATGAAGGTGGGACCCGAAGGTGGTTTAGCAACATCGCTTGCAACCGAGGCTGAAGGCGTGCCTCTGAGATTTACTAAtgatgttgatgttgatactgaaggaaatgtttattttACAGAAAGCAGTACTATTTACCAGAGGAGGAATTTCATTCAGCTGGTATTTTCTGGAGATGATTCTGGAAAGGTTTTGAAATACAACCCTACAACAAAGGAAACCACTGTTCTTGTGAGGAATGTTCAATTCCCAAATGGTATTTCCTTAAGCAAAGATGGCTCCTTCTTTGTTTTTTGCGAAGGGGCTATTGGCAGGCTACGTAAATATTGGCTAAAAGGCGAAAAAGCTGGAACTTCAGAGATCTTAGCCATTCTACCTGGATATCCTGATAACGTACGAGTGAACGAAAATGGCGATTTTTGGGTGGCTCTTCATTGTCGACGATATATGTATGCGTACCTTAATGGTTTGTATCCAAGGATAAGGAAAGCTATACTCAAGCTTCCTATACCAACAAAAATTCAATACTTGTTTCAAATAGGAGGCAAGCAACGTGGTGTGATTGTGAAGTATAGTCCTGAAGGTAAATTGTTGCAGATATTGGAGGATAGTGAGGGAAAAGTTGTTAGAGCAGTGAGTGAAGTTGAGGAGAAAGATGGTCAACTTTGGATAGGAAGTGTTCTTATGCCTTTTATTGCAGTTTATAAATTATAA 1212 0.3977 MLHAFVFSLSNKMSLARGTAVVFLLFALYCGLDPFEHSPIAKFPDFEAKKVDIPPWSEVPNDTDKQNLLQNSEIKFLNQVQGPESIVFDPLGRGPYTGLADGRILFWNGQSWFDFAYTSPNRSLCTPIEAATPFSYVKTEHICGRPLGLRFDKKTGELYIADAYLGLMKVGPEGGLATSLATEAEGVPLRFTNDVDVDTEGNVYFTESSTIYQRRNFIQLVFSGDDSGKVLKYNPTTKETTVLVRNVQFPNGISLSKDGSFFVFCEGAIGRLRKYWLKGEKAGTSEILAILPGYPDNVRVNENGDFWVALHCRRYMYAYLNGLYPRIRKAILKLPIPTKIQYLFQIGGKQRGVIVKYSPEGKLLQILEDSEGKVVRAVSEVEEKDGQLWIGSVLMPFIAVYKL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03293 403 PANTHER STRICTOSIDINE SYNTHASE TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 19 403 - -
Car06g03293 403 SUPERFAMILY Calcium-dependent phosphotriesterase 52 402 - -
Car06g03293 403 Pfam Strictosidine synthase-like, N-terminal 69 106 - -
Car06g03293 403 Pfam Strictosidine synthase 193 280 IPR018119 GO:0009058|GO:0016844
Car06g03293 403 Gene3D - 66 403 IPR011042 -
Car06g03293 403 PANTHER STRICTOSIDINE SYNTHASE-RELATED 19 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03293 Car-Chr6 61646330 61650836 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03293 - - gmx:100803331 683.715