Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03288 ATGTTTAACGGTATGATGGATCCTGACTTGATCAGAATCGCTCAGGAACAGATGAGTCGTATGTCACCTGCTGAATTGGCTCGGATCCAACAACAGATGATGTCTAATCCAGAGCTGATGAGAATGGCTTCAGAAAGCATGAAGAACATGAATCCTGAAGATTTTAAACTTGCCGCTGAACAGTTAAAGCATACTCGGCCTGAAGAAATGGCCGAGATTGGTCAGAAGATGGCTAATGCAACCCCTGATGAAGTAGCGGCTATGCGTACCCATGCTGATGCTCAGATCAAATATCAATTGAATGCGGCTGAGATGCTGAAGAAGCAGGGAAATGAATTTCACAGTCAAGGGAGATTCAATGATGCTTTGCAGAAGTATAAGCTGGCTAAGGAAAATATCAAAGAAATTCCATCTTTTCAAAGTAGAAAGCTTCTTTTGGCATGCTCGCTGAACTTGATGTCCTGTTACTTGAAGACAATGCAGTATGATGAATGCATAAAAGAAGGTTCCGAGGTTTTGGCATATGATGCAAAGAACCTTAAGGCTCTTTATCGAAGAGGTCAGGCATATAAGGAACGAGGCCTGCTCCAGGATGCCGTTACTGATTTGAGCATGGCACTTGAAGTGTCTCCTGACGATGAGATAATTGGAGAGCTTTTACGGGACACCAAGGAACAGTTGATAAAGGAAGGTGGTGATTGTGCACCTGGAAGATTAGTTATTGAAGAAATAACTGAAGAAGTCGAGAATGTGCCTTCTGGAAACAACAAAAGCTCTTCTTTCGAACAAACAGTTGATCAACAAAAAGAGTCTGGTGGCTCGTCTAAGAGCAGCAAAATAGTTAACAATGGAAATCCAAAATTAAATTCAGACAGTTTGGATACACTGAAAAAAGATCCAGAAGCCATCAGGACATTCCAAAACTTCATTTCAAATGCCGATCCTGCCACTCTGGCTTCTTTGAACATCGGACAATCCAAAGATGTGTCTCCAGATATGATTAAAGCATCCTCGGATATGATTGCCAAGATGTCACCTGATGAACTTCAAAAAATGCTTGACATGGCGTCTTCATTTCAAGGGGACAACCCGTTTTTCAGAGGTTCCCCTGATTCTCCTTTCAACCCTGGGTCGATACCTCCCAATGTGACACCTGATATGTTTAAAACAGCAAGTGATATGATAAGTAAAATGCCGGCAGATGACCTTAAGAAGATGTTTGAAATGGCATCCTTACTGAAAGGGAAAGAATCTATTCCATCATCATCAACTGTAACTGTAAACAAGAACGAAAGAAGTGTTTCTCAGTCAAACCTCTCATCCTCCAGTAGCAATCATGCTTTTGGAGATTCAAGTACTTCTCGCGATGCATTTTCAAATACGAGGAATGCTTCAGAGCCAAACTTCCCGTCCTCAAGTACTGATTTACAAGAACAGATGAGAAACTTCCCATCCTCAAGTACTGATTTACAAGAACAGATGAGAAACCAGATGAAAGATCCAGCTATGAGGCAGATGTTTACATCAATGGTTAAAAATATGAGCCCAGAAATGATGGCAAACATGGGAGAACAATTTGGTTTCAAGCTTTCACCAGAAGACGCAGCAAAAGCTCAGCAAGCCATGTCATCCTTATCACCAGAGAACTTGGATAAAATGATGCTTTGGGCGGACAGGATTCAAAGAGGAGTTGAATGTGCAAAAAAGACAAAGAGCTGGTTCCTAGGGAAATCAGGCCTAGTCTTTGCAATATGCATGCTCATTTTGGCTATCATTCTTCACCGGCTAGGTTACATTGGTGGCTAG 1806 0.4175 MFNGMMDPDLIRIAQEQMSRMSPAELARIQQQMMSNPELMRMASESMKNMNPEDFKLAAEQLKHTRPEEMAEIGQKMANATPDEVAAMRTHADAQIKYQLNAAEMLKKQGNEFHSQGRFNDALQKYKLAKENIKEIPSFQSRKLLLACSLNLMSCYLKTMQYDECIKEGSEVLAYDAKNLKALYRRGQAYKERGLLQDAVTDLSMALEVSPDDEIIGELLRDTKEQLIKEGGDCAPGRLVIEEITEEVENVPSGNNKSSSFEQTVDQQKESGGSSKSSKIVNNGNPKLNSDSLDTLKKDPEAIRTFQNFISNADPATLASLNIGQSKDVSPDMIKASSDMIAKMSPDELQKMLDMASSFQGDNPFFRGSPDSPFNPGSIPPNVTPDMFKTASDMISKMPADDLKKMFEMASLLKGKESIPSSSTVTVNKNERSVSQSNLSSSSSNHAFGDSSTSRDAFSNTRNASEPNFPSSSTDLQEQMRNFPSSSTDLQEQMRNQMKDPAMRQMFTSMVKNMSPEMMANMGEQFGFKLSPEDAAKAQQAMSSLSPENLDKMMLWADRIQRGVECAKKTKSWFLGKSGLVFAICMLILAIILHRLGYIGG 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03288 601 Gene3D Tetratricopeptide repeat domain 89 231 IPR011990 GO:0005515
Car06g03288 601 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Car06g03288 601 MobiDBLite consensus disorder prediction 249 291 - -
Car06g03288 601 SUPERFAMILY TPR-like 95 221 IPR011990 GO:0005515
Car06g03288 601 PANTHER OUTER ENVELOPE PROTEIN 61 483 600 - -
Car06g03288 601 PANTHER OUTER ENVELOPE PROTEIN 61 58 482 - -
Car06g03288 601 MobiDBLite consensus disorder prediction 249 294 - -
Car06g03288 601 SMART tpr_5 146 179 IPR019734 GO:0005515
Car06g03288 601 SMART tpr_5 103 136 IPR019734 GO:0005515
Car06g03288 601 SMART tpr_5 180 213 IPR019734 GO:0005515
Car06g03288 601 MobiDBLite consensus disorder prediction 417 493 - -
Car06g03288 601 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 483 600 - -
Car06g03288 601 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 58 482 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03288 99 227 Calmodulin-binding Proteins AT5G48570 32.593 4.27e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03288 - - cam:101514495 1150.96