Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03271 ATGGGTTACCTCAAACCAtgttctgttttcttgttgttagtgttttttgttgcatgtgttaGTGGAGAGGACCCTTATAGATTTTATACTTGGAATGTTACATATGGTGATATTTATCCATTTGGAATTCAACAACAGGGGATATTGATAAATGGACAATTTCCAGGGCCACAGATTGAGTCAGTGACAAATGATAATGTGATTATCAATGTTTTCAACAGCTTGGATGAACCTTTCCTAATCTCTTGGAATGGAGTGCTGCAGAGGAGAAACTCATGGCAAGATGGAGTGTATGGTACAAATTGTCCAATTCCTCCAGGGCAGAACTTCACATATGCTCTTCAAGTAAAAAATCAGATTGGTAGCTATTTCTACTTTCCTTCCCTTGCATTGCACAAGGCAGCAGGCGGTTACGGTGGTCTCAGTGTCGCTAGTCGACCGATGATTCCTGTTCCTTTTGATCCTCCATCAGGAGATTTCACCATTTTGGCAGGAGATTGGTACCAAAAAAGTCATACAGAATTGAGGGCCATTTTAGATAATGGAAATAACCTTCCTTTCCCTGATGGAATTATCATCAACGGTCACGGTTCTAATCCTATCACATTCACGGTTGATCAAGGCAAGACTTACCGATTCCGGATATCGAACGTGGGACTTACAACATCAATAAATTTCAGAATCCAAGGGCATAAAATGAAGCTTGTTGAGGTGGAAGGAACACACACACTCCAAAACATTTATGACTCAATTGACATTCATTTGGGGCAGAGTTATTCTGTGTTGGTTACTGCTGATCAACCACCACAAGACTACTACATTGTTGTCTCAACAAGATTCACCTCAAAAGTGTTGACTGTTGTATCCATTCTTCATTACAGAAACTCAGAAGGAACTGTTTCTGGTCCTTTTCCTCTTGGGCCAACAATTGATACTGAATGGCCCATTGAACAAGTTCGGTCTATTAGGGGGAATCTAACAGCAAGTGGACCAAGACCAAATCTACAAGGAACGTACAAATATGGAATGATAAACACAACACGAACAATAACACTTCAAAATTCAGCTCCAATTATAAATGGAAAACAAAGATATGCTATCAATAGTGTATCATTTATCCCTAGTGATACACCATTGAAATTGGCTGATTACTTCAAAATCCAAGGATTGTTCTCACTTGGAAGTATTTCGGACAACCCCACCGGTGGCGACGGTTATCTTCAGACTTCGGTAATGGCGGCCGATTATCGAGATTATGTGGAAATAGTGTTTCAAAATCCTGAAGACACTTTGCAATCATGGCACATTGATGGTCACTTCTTCTTTGTAGTAGGGATGGATGTAGGACAATGGTCACCTGCAAGCAGGCTAAGCTACAATTTAATAGATGCAGTTTCTCGTTGCACTGTTCAGGTGTATCCAAAGTCATGGACTGCACTATACATGCCATTGGACAATGTAGGAATGTGGAATGTGAGGTCTGAGAATTGGGCTAGACAGTATTTGGGCCAGCAATTTTATCTTAGAGTCTATTCCTCTGCAAATTCATGGAGAGATGAGTACCGAATTCCACCCAATGCACTTCACTGTGGCAAGGTGGTGGGACTCTAA 1611 0.3998 MGYLKPCSVFLLLVFFVACVSGEDPYRFYTWNVTYGDIYPFGIQQQGILINGQFPGPQIESVTNDNVIINVFNSLDEPFLISWNGVLQRRNSWQDGVYGTNCPIPPGQNFTYALQVKNQIGSYFYFPSLALHKAAGGYGGLSVASRPMIPVPFDPPSGDFTILAGDWYQKSHTELRAILDNGNNLPFPDGIIINGHGSNPITFTVDQGKTYRFRISNVGLTTSINFRIQGHKMKLVEVEGTHTLQNIYDSIDIHLGQSYSVLVTADQPPQDYYIVVSTRFTSKVLTVVSILHYRNSEGTVSGPFPLGPTIDTEWPIEQVRSIRGNLTASGPRPNLQGTYKYGMINTTRTITLQNSAPIINGKQRYAINSVSFIPSDTPLKLADYFKIQGLFSLGSISDNPTGGDGYLQTSVMAADYRDYVEIVFQNPEDTLQSWHIDGHFFFVVGMDVGQWSPASRLSYNLIDAVSRCTVQVYPKSWTALYMPLDNVGMWNVRSENWARQYLGQQFYLRVYSSANSWRDEYRIPPNALHCGKVVGL 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03271 536 SUPERFAMILY Cupredoxins 23 173 IPR008972 -
Car06g03271 536 PANTHER MULTI-COPPER OXIDASE 9 532 IPR045087 -
Car06g03271 536 Pfam Multicopper oxidase 33 146 IPR011707 GO:0005507
Car06g03271 536 Pfam Multicopper oxidase 159 295 IPR001117 -
Car06g03271 536 Gene3D - 157 330 IPR008972 -
Car06g03271 536 CDD CuRO_3_AAO_like_1 374 496 IPR034275 GO:0005507
Car06g03271 536 Gene3D - 342 534 IPR008972 -
Car06g03271 536 Gene3D - 26 147 IPR008972 -
Car06g03271 536 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Car06g03271 536 SUPERFAMILY Cupredoxins 343 531 IPR008972 -
Car06g03271 536 Pfam Multicopper oxidase 377 513 IPR011706 GO:0005507|GO:0016491
Car06g03271 536 SUPERFAMILY Cupredoxins 155 333 IPR008972 -
Car06g03271 536 PANTHER L-ASCORBATE OXIDASE HOMOLOG 9 532 - -
Car06g03271 536 CDD CuRO_1_AAO_like_1 28 144 IPR034273 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03271 Car-Chr6 61184939 61189287 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03271 - - vvi:100260211 910.598
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03271 06 61184939 61189287 Car06g03271 06 61184939 61189287 ECH