Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03261 ATGAACAAAGAACAAAAGACGCGCGTGGCATTCACGATCGCCACTATAGGAGCTGCCTTAATCTCCATCTTCTTCACCGTACGCCGTAGGCGGAAGCAGCAAGAGTCTCCTTCGAGTTCGTGCTACTCACATTCCGAACCGAAGCCACAATGGACGTTTAAGCGAGTATTAGCGGATAATTCCTATGCGCCGTTTAAGCATTTGAGCTGCAACGCCTCCGAGAATGGTTCAAATTTGCATCCATTTGAGGCAGAGATTACGGCATTGTTAAGGAATGATCAACCTGAAATTGAACTTAGTGCTGAGAAATTAGAATTGAAAGATTCATATGTTTGGGTTGAAACTGAGATGCAGTTAAAGGAACTGGTCAATGTATTGAGCAAGGAAAGGGTCTTTGCTGTGGACACAGAACAACATAGCTTACACTCTTTTCTAGGCTTTACAGCATTAGTTCAGATTTCTACACAACAGGAAGACTATTTGATTGACACTATTGCCCTGCATGATTCGATGGAAATTCTTCGCCCAGTTTTTGCTAACCCTTCAATTTGTAAAGTGTTCCATGGGGCTGACAATGATGTTCTCTGGCTACAGCGGGATTTCCATATATACATTGTTAATCTATTTGATACTTCAAAGGCATGTGAGGTGCTATCAAAACCACAGAAATCACTTGCTTATTTGCTAGAAACTTACTGTGGTGTGATAACAAATAAATTATTACAGCGTGAAGACTGGAGACAACGCCCTCTCTCAGCAGAAATGGTACTTTATGCACGGACAGATGCACACTATCTATTGTATATTGCCAAGTGTCTGCTCCTTGAACTCAAACAGCTAGACAATGAAAACTCTTGTTCCGATGACAAATTCCATTTTGTTCTCGAGGCTAGTCGACGTTCAAACATGATTTGCTTACAACTTTTCACAAAGGAGATTGAAGCTTCGCCTGGAGAATCTGCTGCATTATCGTTATTTTCACGTCATCAGAGCAATCAAGGTTTTCCTTCAGTTTCCAATGAAACCCAGTTTCTGTATACCGTCAGGCAGCTGTGCACATGGAGAGATTTGATGGCTCGTATTCATGATGAGAGCTTAAAATATGTACTGCCAGACCAGGCAATTGTTGCTTTGGCAAGTCGGCCTCTTGCAAGTCACGCTGAAATATTCAACACCATAGTTCAGATTGATATGAATGCAGAAATAGGTCTGAGCTCTCGCATCCCTTCCCCATCTGCTGTCGTGGACAGTCACCTGAGTGATATCCATCATCTACTTGCAAATGAATTGGTTAACCATGGTGATATTTATTCAGTGATTCTTCAGAAGTGTCTAGGTCAAAATGGAAGTTGTAAACTTAACATATTTAATTATGCTTTGTTGGTTAACATTAATCCGAGACCTGCTTTATCTTATAAACACTCAAGCCTAAAAAATCCTAAACAACATTCCCGTAAGGCTTCTCGAAATTTGTTCGTTAAAAAATTCTCATGCAAATCTCCTGTTTATCACAATTGCCGGATATTTGCTAATGACGGGAGGCTGCTTTGTTATTGTGATCGAAAGAAGCTTGAATGGTACATTAGTCGGGATCTTGCAAAACTTATTGAAGAGGAACCCCCAGCTATAATGCTTCTTTTTGAACCCAAAGGTCGCCCAGAGGATGAAGGCAATGATTTTTATATCCAGAGTAAGAAAAATATATGTGTTGGATGTGGTGAAGGAAGTCACTACTTACGATATCGAATCATCCCATCATGTTACAGAATACATTTCCCTGAGCATCTGAAAAGCCACCGCTCTCATGATATTGTCCTACTTTGTGTGGATTGCCATGAAGTTGCCCATGTTGCTGCAGAGAAGTACAAGAGAAAACTAGCTTCTGAATTTGTGATTCCTCTTTATGTTCGTAAGGTAATCCACCCGGGGCAAGAGACTGAAAATCCGAATGATGAGGGAGGTGTATCTCCGTTACAATTACGAACAGCTGCTATGGCTCTTCTACGTCACGGGCCAAGAATGCCTCTTGATCGCCGTGAAGAACTGACTGAGACTGTAAAGAGATATTATGGAGGAAGGGAGATATCTGAGGAAGATCTAGAAAGAGCTTTGCAAGTTGGCATGAGTCCTCATGAGAGAAGAAAATTTGAGAAGAAGAGAGGGATATCATTTAAACATTCCATGGAAAATGCTGCTGCAATGCCAAAAAGGGAGAATCATGCTGATTCTGCACCTAGTAGAATGAGTAATGGGGACCCTTTGAATTTTGATACTCTTGATGGTTCCTATGCAAATGCAGAAACAACTGGAGATAATAGAGAAGATAGTTTTGGAAAACCGTCTTTGGCTTCTGATCTTGCAGTTGATGGAGCTACTTCAAATGGAAACACCATCCTAGTTACAACTACAGATTATGATGAAGATTCAACACAAGCAAAACATAATTCGAAACTATCACTCTTGGGACATGGTCCACATGGGAAACAAGTTGTAGATCATTTACTGAAGGAGTATGGTGAAGATGGCATTCGAGAGTTCTGTCAAAGATGGAGACAAGTATTTGTGGATGCTTTAAAACCACGTTTTCTTCCTGCTGGATGGGATGTAAAACACAGTGGAAGAAGGGACTTCGGTGACTTCAGTATATACAATCGTGACAAAAAGCAGCTTCTACAGAATGAATGA 2685 0.4093 MNKEQKTRVAFTIATIGAALISIFFTVRRRRKQQESPSSSCYSHSEPKPQWTFKRVLADNSYAPFKHLSCNASENGSNLHPFEAEITALLRNDQPEIELSAEKLELKDSYVWVETEMQLKELVNVLSKERVFAVDTEQHSLHSFLGFTALVQISTQQEDYLIDTIALHDSMEILRPVFANPSICKVFHGADNDVLWLQRDFHIYIVNLFDTSKACEVLSKPQKSLAYLLETYCGVITNKLLQREDWRQRPLSAEMVLYARTDAHYLLYIAKCLLLELKQLDNENSCSDDKFHFVLEASRRSNMICLQLFTKEIEASPGESAALSLFSRHQSNQGFPSVSNETQFLYTVRQLCTWRDLMARIHDESLKYVLPDQAIVALASRPLASHAEIFNTIVQIDMNAEIGLSSRIPSPSAVVDSHLSDIHHLLANELVNHGDIYSVILQKCLGQNGSCKLNIFNYALLVNINPRPALSYKHSSLKNPKQHSRKASRNLFVKKFSCKSPVYHNCRIFANDGRLLCYCDRKKLEWYISRDLAKLIEEEPPAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGSHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHVAAEKYKRKLASEFVIPLYVRKVIHPGQETENPNDEGGVSPLQLRTAAMALLRHGPRMPLDRREELTETVKRYYGGREISEEDLERALQVGMSPHERRKFEKKRGISFKHSMENAAAMPKRENHADSAPSRMSNGDPLNFDTLDGSYANAETTGDNREDSFGKPSLASDLAVDGATSNGNTILVTTTDYDEDSTQAKHNSKLSLLGHGPHGKQVVDHLLKEYGEDGIREFCQRWRQVFVDALKPRFLPAGWDVKHSGRRDFGDFSIYNRDKKQLLQNE 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03261 894 MobiDBLite consensus disorder prediction 705 743 - -
Car06g03261 894 PANTHER POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED 1 889 IPR045092 GO:0000175|GO:0000467
Car06g03261 894 MobiDBLite consensus disorder prediction 744 771 - -
Car06g03261 894 PANTHER PROTEIN RRP6-LIKE 3 1 889 - -
Car06g03261 894 SUPERFAMILY Ribonuclease H-like 48 280 IPR012337 -
Car06g03261 894 SMART 35exoneu6 110 278 IPR002562 GO:0003676|GO:0006139|GO:0008408
Car06g03261 894 MobiDBLite consensus disorder prediction 705 788 - -
Car06g03261 894 Pfam 3'-5' exonuclease 110 277 IPR002562 GO:0003676|GO:0006139|GO:0008408
Car06g03261 894 Gene3D HRDC domain 335 435 IPR044876 -
Car06g03261 894 SUPERFAMILY HRDC-like 342 397 IPR010997 GO:0000166|GO:0044237
Car06g03261 894 Gene3D - 28 315 IPR036397 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03261 Car-Chr6 60543425 60550247 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03261 K12951 - gmx:100791485 1365.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03261 06 60543425 60550247 Car06g03261 06 60543425 60550247 ECH