Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03260 ATGGCAGAACCCAAAGTTAAATACGATCGCCAACTCAGAATATGGGGTGACCAGGGACAGGCAGCCCTTGAGAAATCTAATATTTGCTTGCTTAACTGTGGACCTACTGGTTCTGAGACACTCAAGAATCTTGTTCTTGGTGGTATTGGAAGCATCACTGTAGTCGATGGATCTAAAGTTGAAGTCGGTGACCTTGGAAACAATTTTTTGGTTGATGAATCATTCCTTGGGCAGTCAAAGGCAAAATGTGTTTGCTCATTTCTCCAGGAGCTGAATGATGCAGTCAAAGCAAAATTTGTAGAAGAGTATCCAGATGCATTGATTGAGACAAACCCATCATTCTTTTCTCAATTTACCCTGGTTGTTGCCACACAGCTGGGGGAAAGTTCAATGGTAAAGCTTGACCAAATCTGCAGGAAGGCAAATGTTATGTTGATATTTGCCCGCTCCTATGGCCTTACTGGGTTTGTTCGAATCAGTTTGAAGGAACATACTGTGATTGAGTCAAAGCCTGAGCATTTTCTGGATGATCTTCGGTTACATAATCCTTGGCCTGAACTCAAGAGGTTTGCAGAGGACATTGACTTGAACGTGCAAGACCCTGTTGCTCATAAGCATATACCTTATGTTGTCATTCTTGTCAAGATGGCTGATGAGTGGGCCAAAAGCCATGGTGGTAGGCTTCCATCGACCAGAGAAGAAAAAAAGGAGTTCAAGGAGCTTCTCAAGGCTGGGATGGTTGCACAAGATGAAGATAATTATAAAGAAGCTATCGAATCCTCATTCAAAGTATTTGCCTCCCAAGGAATTAGTTCGGAGTTGCAACAGATACTAAATGATAATTCTGCTGAAGTAGACGCTAGTTCGTCAGATTTTTGGGTTTTGGTAGCAGCTCTGAAGGATTTTGTTAAAAATGAAGGTGGTGGGGAGGCACCTCTCGAAGGATCTATACCAGATATGACCTCCTCCACTGAGCAATATGTGAATTTGCAGCATATCTATCAGGCTAAGGCTGAGGCTGACTTTGTTGCAATAGAACGACTGACGAGAAGTACTTTGAAGAAAATTGGTAGAGATCCAAATAGCATTCCAAGGGCAACAATTAAAAGCTTCTGTAAAAATGCAAGAAAACTCAAAGTTTGCAGATATCGTCTGATTGAAGATGAGTTTAATTCTCCAAATGTACCTGAGTTACAGAAGTACCTAACTGACGAGGATTACAGCATTGCTGTGGGAATTTATGTTTTGCTTCGTGCTGTTGACCGGTTTGCTGCTAATTACAACAGTTTTCCTGGACAGTTTGACAGTGCAATGGATGAGGATATACCTCGACTAAAGAGCACAGCAATTGGCCTACTTAATGACTTGGGATGCAACGGTGCTACTTTGGCTGAAGACCTTATCAATGAGATGTGTCGATTTGGTGCTGCAGAGCTTCATGCTGTTGCTGCTTTGGTTGGAGGAATTGCATCGCAAGAAGTGATCAAGCTCATAACAAGGCAATTTGTACCAATGTCCGGGACCTACATATTCAACGGCATTGACCACAACTCACAGCTATTGTCATTAGTTCTATTAAAAGATGCCTTTGTTTCTTAG 1599 0.4209 MAEPKVKYDRQLRIWGDQGQAALEKSNICLLNCGPTGSETLKNLVLGGIGSITVVDGSKVEVGDLGNNFLVDESFLGQSKAKCVCSFLQELNDAVKAKFVEEYPDALIETNPSFFSQFTLVVATQLGESSMVKLDQICRKANVMLIFARSYGLTGFVRISLKEHTVIESKPEHFLDDLRLHNPWPELKRFAEDIDLNVQDPVAHKHIPYVVILVKMADEWAKSHGGRLPSTREEKKEFKELLKAGMVAQDEDNYKEAIESSFKVFASQGISSELQQILNDNSAEVDASSSDFWVLVAALKDFVKNEGGGEAPLEGSIPDMTSSTEQYVNLQHIYQAKAEADFVAIERLTRSTLKKIGRDPNSIPRATIKSFCKNARKLKVCRYRLIEDEFNSPNVPELQKYLTDEDYSIAVGIYVLLRAVDRFAANYNSFPGQFDSAMDEDIPRLKSTAIGLLNDLGCNGATLAEDLINEMCRFGAAELHAVAALVGGIASQEVIKLITRQFVPMSGTYIFNGIDHNSQLLSLVLLKDAFVS 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03260 532 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 519 IPR035985 GO:0008641
Car06g03260 532 Pfam ThiF family 8 501 IPR000594 -
Car06g03260 532 CDD APPBP1_RUB 7 521 - -
Car06g03260 532 PIRSF APP-BP1 1 523 IPR030667 GO:0019781|GO:0045116
Car06g03260 532 PANTHER NEDD8-ACTIVATING ENZYME E1 REGULATORY SUBUNIT AXR1 2 523 - -
Car06g03260 532 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 2 523 IPR045886 -
Car06g03260 532 Gene3D - 361 523 - -
Car06g03260 532 Gene3D - 2 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03260 Car-Chr6 60519907 60537013 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03260 8 157 EF-hand Containing Proteins AT2G30110 28.947 1.03e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03260 K04532 - gmx:100793799 951.044
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03260 06 60519907 60537013 Car06g03260 06 60519907 60537013 ECH