Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03252 aTGTCCCAATTTAATCATAAAGGTGGTCAGTCCTCCACGCTCGGGCGGAGGATTCACCACCGTGTGTCGTTGCTTCGCCGATGTATCCTCCGTGCTCTTCAACGGTTTCTTGTCTGTTCCGGAAAGAAGCCCGGTGCTAATGCCACATATAGCATGTTACCGCCACGTGCCGCATTACCCTCTCCTCTGCCGCCGTTGGAATCCACCGTAGAATCTGCCCCACCACCGTTGTTTCACACACATGAATTGGACACTGATTTGGTTTCTCTCAAAATCAGCTTGTTGGGTGATTGCCAAATTGGAAAAACCAGCTTTTTGGTGAAATATGTAGGGAATGAAAAAGAACAAGGAGGGGAACAGAGGAAAGGGGTAAATCAAATGGACAAAACTTTGGTTGTGGGTGGAGCACGTATATCCTACTGTCTCTGGGAAGTACAAGGGGATGGGAAATCAGAAGACCAGATTCCAATGGCATGTAAGGATTCAGTGGCAATTTTAATCATGTTTGATCTAACAAGTCGATGCACATTAAACAGTGTTCTGGGATGGTATAAAGAAGCAAGGAAATGGAATCAGACGGCAATACCAGTATTGATAGGAACCAAGTTTGATGATTTCATTCAGCTCCCTATTGATATGCAATGGACCATTGCTAGTGAGGCTAGAACATATGCAAAGGCCTTGAATGCCACTTTGTTCTTTTCAAGTGCAACATACAACATCAATGTGAACAAGATCTTCAAGTTCATCACTGCAAAACTCTTTGACTTACCATGGACAGTAGAAAGGAATCTAAATGTTGGAGAACCCATCATTGATTTTTGA 825 0.4376 MSQFNHKGGQSSTLGRRIHHRVSLLRRCILRALQRFLVCSGKKPGANATYSMLPPRAALPSPLPPLESTVESAPPPLFHTHELDTDLVSLKISLLGDCQIGKTSFLVKYVGNEKEQGGEQRKGVNQMDKTLVVGGARISYCLWEVQGDGKSEDQIPMACKDSVAILIMFDLTSRCTLNSVLGWYKEARKWNQTAIPVLIGTKFDDFIQLPIDMQWTIASEARTYAKALNATLFFSSATYNINVNKIFKFITAKLFDLPWTVERNLNVGEPIIDF 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03252 274 Pfam Ras family 91 254 IPR001806 GO:0003924|GO:0005525
Car06g03252 274 ProSiteProfiles small GTPase Rab1 family profile. 84 274 - -
Car06g03252 274 SMART rho_sub_3 92 256 IPR001806 GO:0003924|GO:0005525
Car06g03252 274 Gene3D - 81 265 IPR027417 -
Car06g03252 274 PANTHER MONOMERIC G-PROTEIN 65 273 - -
Car06g03252 274 SMART rab_sub_5 90 257 - -
Car06g03252 274 PANTHER - 65 273 - -
Car06g03252 274 PRINTS Transforming protein P21 ras signature 90 111 - -
Car06g03252 274 PRINTS Transforming protein P21 ras signature 131 153 - -
Car06g03252 274 PRINTS Transforming protein P21 ras signature 192 205 - -
Car06g03252 274 PRINTS Transforming protein P21 ras signature 232 254 - -
Car06g03252 274 CDD Spg1 90 271 IPR017231 -
Car06g03252 274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 90 267 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03252 Car-Chr6 60308511 60313125 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03252 K07976 - gmx:100780638 426.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03252 06 60308511 60313125 Car06g03252 06 60308511 60313125 ECH