Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03230 ATGGGGGGTGATATTCTGTATCGCCTTTTTTGCTCTTACATGGGAGGCACTAATACTATTCATTATTATGTTTCTCTTGTTATTCTCGTTAATGGCAGGAGAGATTATTTAGGTAATGACTTGAGGGATAAACTTGATAGAAGGCATTTATCACCTCCAAGATATTCACCAGCTCGAGATGCAAGAGAATACAGTCCACTGAGTGACAGAAGACATAGGAGAAAACACGACATCAGTGGCCATAGTGATATTTCTGGAAGTTTGAAAGTCTCTGAAAGAATTAATGATCAAGTTAAAGAGGGAAAATTGCTTCCCTCTGGTTCTAGGAATACTCTTGAGGAGCAGCTGAAGAAAGTACATTCCGATATCAACACTCTTGAGAACCGAAAATTCCAACTAGCGGTCTACCTAGATGAGAGTGTTCAAGAAGTGGATAGCCTAAATTCTAGAATTGAGGAACTTGAGGCTCAATTAAACAAGGAGAATGAGGAGTGTAAAAGAGTTACTTCAAGAATAAGAAAGTTTGTTCGAATGCACAATCAAAATTTGGAGTTGCAAGATGAACTGAAGAGGCGAGTCCGACTTGAAAGGTTTGGAGTTCAACTTGTCTCAGACATTTCTAGAATTGGTGCTAATGAGGAAGATTTAAGCGTTGATATTGTAAGCAATGGTGAGAATATTGGTCTTCCTCCAATCATCAAACATAATTTGGAGCAGAATGGCAGATCTCCCTGCAGAAAAAGGCTGCATGTGGAACAAGATTCTGTGGAAGAGCTAAAACAAGTTAAATCTAAAGTAGGGCATTTAGTTGAAACAGCAAGAACCAGTAAGCGTACTCGATGGAATTTGTCTGCTCAATCAAATAACAAGGGTTATGAAGAGGCACCAGACAATGGAATTGAAGTTACTAGGCACCAAGATCTTGAAGGAAAAAAGCATAAGAAAGGAATATGGAATTCTTCTAACAACATTCATTCAGAAAAGCTGAAGGAATCCAGGATCGAAGTGCCATCAACCAGTATGGCAGCTCATGTGTTTGAAGAGGAAGTTGAGATTGAACATGATAACGGAAATGATATCAAAGAAACTTCAAACACTGAAAATGACAACGGAGTGGTATTCCAGGTGAAGGGCACACCTTTTATGCTTCCCACAGATTTGATTCCCCATAGCAATTATTCGCAG 1185 0.3916 MGGDILYRLFCSYMGGTNTIHYYVSLVILVNGRRDYLGNDLRDKLDRRHLSPPRYSPARDAREYSPLSDRRHRRKHDISGHSDISGSLKVSERINDQVKEGKLLPSGSRNTLEEQLKKVHSDINTLENRKFQLAVYLDESVQEVDSLNSRIEELEAQLNKENEECKRVTSRIRKFVRMHNQNLELQDELKRRVRLERFGVQLVSDISRIGANEEDLSVDIVSNGENIGLPPIIKHNLEQNGRSPCRKRLHVEQDSVEELKQVKSKVGHLVETARTSKRTRWNLSAQSNNKGYEEAPDNGIEVTRHQDLEGKKHKKGIWNSSNNIHSEKLKESRIEVPSTSMAAHVFEEEVEIEHDNGNDIKETSNTENDNGVVFQVKGTPFMLPTDLIPHSNYSQ 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03230 395 MobiDBLite consensus disorder prediction 47 84 - -
Car06g03230 395 Coils Coil 137 171 - -
Car06g03230 395 SUPERFAMILY Troponin coil-coiled subunits 106 173 IPR038077 -
Car06g03230 395 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 31 395 IPR045868 GO:0046872
Car06g03230 395 Coils Coil 109 129 - -
Car06g03230 395 MobiDBLite consensus disorder prediction 63 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03230 Car-Chr6 59727494 59732182 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03230 - - gmx:100811131 484.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03230 06 59727494 59732182 Car06g03230 06 59727494 59732182 ECH