Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03220 ATGGAAGGTTGCTGCAATCTTGAAGTGGATGTAAATGGAGAAGAGACATTCATGGTGGATAAGACTATTGTTACTCAATATTCAAGCAAATTGGCTAAAATATTTGGAAAATCTAGTGGTGCAAATGGAAAGCTTAAAGTTATATTTCATGATTTTCCAGGAGGTGCAGAAGGTTTTGAGCTTATGTTAAGATTTTGTTATAACAATGGAAAATCTAATATAACTCCTTCAAATCTTTTACTTGCACACTGTGCTGCTGAATATATGGAAATGAATGAATCTGTCACTAATGTTTCTAATTTATTGGATCAAACTGAAAAATCACTTCAAGGGATTAACTTTTGGACATGGTCAGAAATTTTGATTGGTTTAAAACAATGTCAGAATTTACTAGTTGATGATTCTTGTGTTATGCTAGAGAAATGTTTGGATACTATTGTCGGAAGGCTTGTTTTGGCTAGCGAAGCTAGCCCGTGTCCGTCAACTTGTTCTAATGACAGTTCATCAGGGATTCGATTTTCGTGCGACTCGAAGAGTACTGAGAGTATTAAGACTAATTTTGCTCGCTCGACGTGGTGGTTTGAAGATCTGTTATTTCTGACTCCTTTGGTGGTTGCCATGTTGGTTAAGTCGATGCTTTCGAGTAAAATGGATCATCATGTTATCAGTAGGTTTCTTCTTTATTATCAGAAGGCGAAATTCTCGACTGCTATGACGGACGAGAAGTGCAAGATCATAGAAATGGTGATAGATATGCATTATATTATGGACCGTAGTTCTGTTTCTTTGAAGACATTGTTTGGGATTCTTAGGGTTACTTTGTGTTTGAACATAAGTAAATGTGGTAGGAATAAGTTGGAGAATATGATTGGTTTTCAATTGGATCAAGTTACCTTAGATAATTTGCTTGTTCCATCTCCTTATGGAATAAACTACTTGTATGATGTGAATCTTGTTCTCAGATTTTTGAAAGCATTTCTGCGGCAAGGGACTGGTGCGGTCGCTCCGATTCGAATGAAGAAAGTTGCTAGTTTGATAGATTTGTATATAGCAGAAATAGCACCTGATCCTTGTTTAAAAACTTCAAAGTTTTTGGCACTTGCTACATCTATTCCTGATTTTGCTAGAGATTCTTGTGATGAGCTCTACCATGCAATGGACATGTATCTTGAGGTACATACTCAATTGTCACAAGAAGAAAAGTTGAAGATATGCTGTGGTTTAAATTATGAGAAGCTATCACCTCAAGCATGCCTACACCTTTCTAAGAACAAAAAGTTTCCATCAAAATCAGCAGTTCAGGCTCTCATATCTGAACAATCTAAGCTAAAAAATTTACTCCATGCTACTACTACTCCTATTTCAACTCCATACAATGAATCTCTGTGTGGTTCTAGTAGTGCTTCTCAAAAGGGTAAAAAAGACAAAACAAGTGAACAACTCGTGTTGTATGCTGGTAATTTTGATATTCAACCTGATAATGAGAAACTTAGAGCACATTTGCAAGGAATGCAATGGAGGGTTATGGAGTTAGAGAAAATCTGTAGGAAAATGCAAACTCAGATGGCTAAGATGACAAAATCAAAAGCTTCAGGACATAGTTATGCAAAATCTTTGCCAAAGCTCTGTTCATGA 1635 0.3621 MEGCCNLEVDVNGEETFMVDKTIVTQYSSKLAKIFGKSSGANGKLKVIFHDFPGGAEGFELMLRFCYNNGKSNITPSNLLLAHCAAEYMEMNESVTNVSNLLDQTEKSLQGINFWTWSEILIGLKQCQNLLVDDSCVMLEKCLDTIVGRLVLASEASPCPSTCSNDSSSGIRFSCDSKSTESIKTNFARSTWWFEDLLFLTPLVVAMLVKSMLSSKMDHHVISRFLLYYQKAKFSTAMTDEKCKIIEMVIDMHYIMDRSSVSLKTLFGILRVTLCLNISKCGRNKLENMIGFQLDQVTLDNLLVPSPYGINYLYDVNLVLRFLKAFLRQGTGAVAPIRMKKVASLIDLYIAEIAPDPCLKTSKFLALATSIPDFARDSCDELYHAMDMYLEVHTQLSQEEKLKICCGLNYEKLSPQACLHLSKNKKFPSKSAVQALISEQSKLKNLLHATTTPISTPYNESLCGSSSASQKGKKDKTSEQLVLYAGNFDIQPDNEKLRAHLQGMQWRVMELEKICRKMQTQMAKMTKSKASGHSYAKSLPKLCS 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03220 544 SUPERFAMILY POZ domain 4 102 IPR011333 -
Car06g03220 544 SMART BTB_4 5 106 IPR000210 GO:0005515
Car06g03220 544 MobiDBLite consensus disorder prediction 525 544 - -
Car06g03220 544 Pfam NPH3 family 191 418 IPR027356 -
Car06g03220 544 ProSiteProfiles NPH3 domain profile. 191 442 IPR027356 -
Car06g03220 544 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 11 544 - -
Car06g03220 544 Gene3D Potassium Channel Kv1.1; Chain A 2 113 IPR011333 -
Car06g03220 544 PANTHER OS12G0117600 PROTEIN 11 544 IPR043454 -
Car06g03220 544 ProSiteProfiles BTB domain profile. 5 69 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03220 Car-Chr6 59404019 59408526 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03220 17 524 EF-hand Containing Proteins AT3G44820 25.480 2.35e-52 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03220 - - gmx:100784792 891.723