Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03210 ATGCAATTTCATGCAATGGAGACAAGATCTGCAAAACGCAAAAAAATTGCTCAAAAACAACAAGACAACAATGCCAAAACAACACCATCCAAAGATCTAATCAGTGATCTACCTGATGATATTATTCATCAAATTCTTCTTCTTCTTCCCATTAAATCTGTTGCACAAATGAGTGTTCTTTCCAAAAGATGGAAATTTCTTTGGACAACTTTTCCTTACCTTGATTTCACAACCCTTAATCCATTTCCACTTATTTCATCCAAAAGCCATAAGAAAAATTCAAACTTTGAAAAATCAAGACACCCCTTTTCATCAACAAGATTGGATTTCATAACCCAAGTTTTAAATCTTCGTGATATTAAATATAAAGACATAAGGGTCCTCTGTTTTCGTGCAAGTTTGAGTTTTTCTTGTTTGAATAGATTGGTTCGTAATGCCATTAGGCATAATGTTAGAgaacttgatattgaagttgaaacagaatttgaTTATGATAATTTTTTCAACTTTCCTAGATGTGTTATTAGTAGTGAATCATTAAGCGTTTTGAAATTGAAATCGGGTTTTCGATTGCCACCATCGAAAATTATGAAAGATGGGTTTCAATCTTTGCAAACATTGTCATTATCTCAAGTTATTTTGTATAATCAACCTTCTCTTTTTGATTTGTTCTCTGAGTCTTCATTTCCTCTTTTGAGAAACTTGCACCTTGATTTGTGCTTTGGATTAACACATCTTCGAGTCGCTTGTCGTGTTCTTGAAGATTTGAGGTTGGAAAGATGTTATCAATTACAAGGTTTGGATGTTTCTTGTGGAAAACTTGTGAGAATGAAAGTTGTGAGTTGTTTTGATTCTTATAGTGAGAAGACTTGGGTGAGAATTAATGTGCCTAATGTTGAACATTTGTTTTGGCAATATAATGCTGTCACTGATGTTACTGTTTTTGAGAATTCAAGTTTTTTGCATGAGGCTTCTATTGGTTTGTTTATGTTGAAGGAAGGTAAAGTTGATTTGGATAGGCTTCAAAGTGCAAATACCTTCTTGTGTGGTTTGTCTCATGTTCATTCTTTGACTCTTCAAAGCCAAACTATTGAGGTTCTATCAAATTATAGCTTCTTTGTTCTTCCATTTGAGAATCTTAAATCATTAGAGCTGCGTACTGGTTTCAACAAAAGTAATGTTGAAGCAATATCATGCCTATTTAGAAGCTCTCCTACCCTCCACACATTGATTCTTGAGATCACTAACGATTATAAGATTGAAAGAAAACAATGGAATAGGGACTTGTGGGACATGAATAATACTGAAGAAGAGCAATATTGGGAATCTCACATACCATGTTTGAAGTCTTTTCTAGAACACTTGAAAGTTGTGAAAATTCAAGGTTTTCAAGATTGTGCAAATGAAGTAACATTAGCTAAGTTTCTTCTCAAGAATGGAAAGAATTTGGAAGAAATGATATTGTGCACAGGGCATTCAAATAGGAGAGATACTCTTAGGAGACAAAAGATAAGGTCACAAATGATGGGATTTTCTTGGGCCTCTTCTAATGCTAAAGTGGAATTTCAATAG 1572 0.3308 MQFHAMETRSAKRKKIAQKQQDNNAKTTPSKDLISDLPDDIIHQILLLLPIKSVAQMSVLSKRWKFLWTTFPYLDFTTLNPFPLISSKSHKKNSNFEKSRHPFSSTRLDFITQVLNLRDIKYKDIRVLCFRASLSFSCLNRLVRNAIRHNVRELDIEVETEFDYDNFFNFPRCVISSESLSVLKLKSGFRLPPSKIMKDGFQSLQTLSLSQVILYNQPSLFDLFSESSFPLLRNLHLDLCFGLTHLRVACRVLEDLRLERCYQLQGLDVSCGKLVRMKVVSCFDSYSEKTWVRINVPNVEHLFWQYNAVTDVTVFENSSFLHEASIGLFMLKEGKVDLDRLQSANTFLCGLSHVHSLTLQSQTIEVLSNYSFFVLPFENLKSLELRTGFNKSNVEAISCLFRSSPTLHTLILEITNDYKIERKQWNRDLWDMNNTEEEQYWESHIPCLKSFLEHLKVVKIQGFQDCANEVTLAKFLLKNGKNLEEMILCTGHSNRRDTLRRQKIRSQMMGFSWASSNAKVEFQ 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03210 523 ProSiteProfiles F-box domain profile. 31 79 IPR001810 GO:0005515
Car06g03210 523 Pfam FBD 449 488 IPR006566 -
Car06g03210 523 Gene3D Ribonuclease Inhibitor 30 319 IPR032675 -
Car06g03210 523 MobiDBLite consensus disorder prediction 1 31 - -
Car06g03210 523 PANTHER F-BOX PROTEIN-LIKE 25 468 - -
Car06g03210 523 Pfam F-box domain 34 69 IPR001810 GO:0005515
Car06g03210 523 SUPERFAMILY RNI-like 178 462 - -
Car06g03210 523 SMART fbox_2 37 77 IPR001810 GO:0005515
Car06g03210 523 SUPERFAMILY F-box domain 22 88 IPR036047 GO:0005515
Car06g03210 523 SMART 9598neu4hmm 449 523 IPR006566 -
Car06g03210 523 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 25 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03210 Car-Chr6 59300424 59303610 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03210 30 413 EF-hand Containing Proteins AT5G41840 24.641 2.56e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03210 - - ahf:114927451 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03210 06 59300424 59303610 Car06g03210 06 59300424 59303610 ECH