Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03209 ATGTCTACCAATGACAAATCAAATGGTTTTGAAGATTTGTTACCAGTGATAGCCAACAAGCTAGGTGGTGAAGGATTAATCAAAGAGCTATGTAATGGGTTTCAATTGTTGATGGATAAAGACAAAGGGGTAATCACTTTGGATAGTTTGAGAAGAAATGCTGCACTTTTGGGTCTTCAAGATTTGAAGGAAGATGAACTTGTTAGCATGATGAAAGAAGGTGATTTAGATAATGATGGAATACTTACTCAAATGGAATTTTGTGTTTTGATGTTTAGGTTGAGTCCTGAATTGATGGAAGAGTCTTGGTTTTGGCTTGAGGAAGCACTTAATCATGAACTTGGCAACAATAGTAATAACTTTTCTTCTTTCTAG 375 0.352 MSTNDKSNGFEDLLPVIANKLGGEGLIKELCNGFQLLMDKDKGVITLDSLRRNAALLGLQDLKEDELVSMMKEGDLDNDGILTQMEFCVLMFRLSPELMEESWFWLEEALNHELGNNSNNFSSF 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03209 124 PANTHER CALCIUM-BINDING PROTEIN KIC 4 118 IPR044205 GO:0005509
Car06g03209 124 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 4 118 - -
Car06g03209 124 Pfam EF-hand domain pair 42 93 IPR002048 GO:0005509
Car06g03209 124 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
Car06g03209 124 SUPERFAMILY EF-hand 25 103 IPR011992 -
Car06g03209 124 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Car06g03209 124 Gene3D - 8 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03209 Car-Chr6 59295757 59296618 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03209 10 114 EF-hand Containing Proteins AT5G54490 63.208 2.45e-43 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03209 K24345 - gmx:100527206 205.297
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03209 06 59295757 59296618 Car06g03209 06 59295757 59296618 ECH