Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03206 ATGTTTAAATTTTCATGTTTTCATGTTAATGTTCAAGGCAACAAGGCAAAGAAAATAGCTCAACCTTCTACTGAAGCAATGGCAAAAGCATCCCAAGATAGTTTCAAAAATCCAGTCAGTAAAGATTTGTCTAACCCTACGAGTTTAAGTTCGTCGTTGTCAAAACAACAATCACATAAGCTAATGAATGTCTCCGAGAATGACGTTCTCAACCAGGATTCAGTTGAGCGTGTTGGTAGTTTCGAGGATCTGAATAGTAAGTTTTTCATTGAATTTGACAGAAAAGCCAGTCAAGCTGGCCGAATTAAGAAAAGTCAGTCCTTGGAAAGCGGGCTTTACCAAGCTGAGGGCGATCATTGTAAAACGAATTCAAACGCAGAGTTTCAAGTCATTCCTGGTCTTGGAAATGATTGCTCACTTTTTTCAATAGGAGATCCAACACCTTCGGATAAAGATGCTCGAGAAAATTCCGATAGTCCATTATCCGGTGATCTTGCTTGTGACTCTGCTGAACAGACGTCTGGTCCTAGTACACCATCATTGATGAAGTCACGTTCTTTGCCCAATATGAAAGCTTCTATGCTTTCTTCTGGAAATAATCATGCTCTAAAATATGCATCTTCAATATCAAGATCTTCTGATGATCTTTATGCTTTAGGCTTGAGGAAGAAAGAGGTGTCCATTGATGAGTCTTATGATCAAATAAGGGAATCTCAAGAAAGAGAAAGCGGCATGGAAAAGCTCGAAGATAGTTGTTTGGACAGATACTCTGACGATGGTTTGACAGAAGACTGGATAATGCCGATTACAGACGAAATAAGTGATGACAAAACCCCTCAAGGAGATTCCTCAGTTGATTGCTTGAGTGAATTTCCCTCGACAGATTTTAAGGTTAAGCGCATTGAGGATTGGGTAACCGGTCTACAGCATTGTGCACCGCCTCTAGAGGATATCAATGAATTGCCTGAATCTGTTGAACCTGTTGTTGATGTTAACACCATAAATAGCGTCACGGCTTCGGTTGTGGATCATAAGATCACTCCAGGAATGGAAGCCGCTAAAAGATATATATCTTCTTTGACTGCCAATGCCACCACGGCTCAGCTGGCAAATCACGGGTTGGTTGTGATCCCCTTTTTGAGTGCATTTGTGAGTTTGAAGGTTCTCAATTTATCTGGAAACGCGATTGTTAGAATAACTGCTGGTTCCCTTCCTCGAGGACTTCACACATTAAATTTGTCAAAAAACAATATCGCCACTATAGAGGGACTACGTGAACTTACACGGCTTCGTGTCCTAGACCTCAGCTACAACCGTATACTAAGAATCGGACACGGCCTGGCATCCTGTTCTTCTCTAAAGGAGCTGTATCTTGCTGGAAATAAAATCGGCGAAGTAGAAGCCAACTATAATTCTTTGCTAGCTATCAACTTGGAAGGGAACCCTTGCCAGAAAAATGTTGGTGACGAACAACTGAAGAAACATCTGCAAGGCCTTCTTCCCCACCTTGTCTACTACAATCGACAAACTATCAAAGCCAATGGTTTGAAGGACGGTGCAGATCGCGCAGTTCGATTAGGAATGAATTCCCAACAGTTTGATCGCAGTCTTAGAGTGGATCGCAAGTCTACAAGGAAGGGGAACCATGGTTCTGTAGCTGCTCGGAGGCCATCATCCGCGTCCTCTTCCACTCACAGAGGGCAAACAACGGACTCTTCGAAACTGTCCAAAGGAAAGCAAGGCCACCTCCCACCAATCAGAACCAAAACATCAACCCAAAGTCGCCATCCTTTTGATTCTCCCGGCCAAGCATCAATCCAAAGTAACAATCACTTCATGCGCAAGAGTCGCAGCGAGGGAACTCTTGGAGTTTTGTAA 1878 0.4292 MFKFSCFHVNVQGNKAKKIAQPSTEAMAKASQDSFKNPVSKDLSNPTSLSSSLSKQQSHKLMNVSENDVLNQDSVERVGSFEDLNSKFFIEFDRKASQAGRIKKSQSLESGLYQAEGDHCKTNSNAEFQVIPGLGNDCSLFSIGDPTPSDKDARENSDSPLSGDLACDSAEQTSGPSTPSLMKSRSLPNMKASMLSSGNNHALKYASSISRSSDDLYALGLRKKEVSIDESYDQIRESQERESGMEKLEDSCLDRYSDDGLTEDWIMPITDEISDDKTPQGDSSVDCLSEFPSTDFKVKRIEDWVTGLQHCAPPLEDINELPESVEPVVDVNTINSVTASVVDHKITPGMEAAKRYISSLTANATTAQLANHGLVVIPFLSAFVSLKVLNLSGNAIVRITAGSLPRGLHTLNLSKNNIATIEGLRELTRLRVLDLSYNRILRIGHGLASCSSLKELYLAGNKIGEVEANYNSLLAINLEGNPCQKNVGDEQLKKHLQGLLPHLVYYNRQTIKANGLKDGADRAVRLGMNSQQFDRSLRVDRKSTRKGNHGSVAARRPSSASSSTHRGQTTDSSKLSKGKQGHLPPIRTKTSTQSRHPFDSPGQASIQSNNHFMRKSRSEGTLGVL 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03206 625 MobiDBLite consensus disorder prediction 554 577 - -
Car06g03206 625 Pfam Leucine rich repeat 385 440 IPR001611 GO:0005515
Car06g03206 625 Gene3D Ribonuclease Inhibitor 337 518 IPR032675 -
Car06g03206 625 ProSiteProfiles Leucine-rich repeat profile. 429 451 IPR001611 GO:0005515
Car06g03206 625 PANTHER NISCHARIN RELATED 467 623 - -
Car06g03206 625 PANTHER NISCHARIN RELATED 134 467 - -
Car06g03206 625 ProSiteProfiles Leucine-rich repeat profile. 452 474 IPR001611 GO:0005515
Car06g03206 625 MobiDBLite consensus disorder prediction 24 58 - -
Car06g03206 625 MobiDBLite consensus disorder prediction 141 185 - -
Car06g03206 625 SMART LRR_typ_2 427 450 IPR003591 -
Car06g03206 625 SMART LRR_typ_2 383 406 IPR003591 -
Car06g03206 625 MobiDBLite consensus disorder prediction 162 185 - -
Car06g03206 625 MobiDBLite consensus disorder prediction 585 616 - -
Car06g03206 625 Pfam Leucine Rich repeat 449 464 IPR001611 GO:0005515
Car06g03206 625 MobiDBLite consensus disorder prediction 534 625 - -
Car06g03206 625 PANTHER BNAA09G01440D PROTEIN 467 623 - -
Car06g03206 625 PANTHER BNAA09G01440D PROTEIN 134 467 - -
Car06g03206 625 SUPERFAMILY Outer arm dynein light chain 1 363 508 - -
Car06g03206 625 ProSiteProfiles Leucine-rich repeat profile. 407 428 IPR001611 GO:0005515
Car06g03206 625 MobiDBLite consensus disorder prediction 25 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03206 Car-Chr6 59231062 59233367 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03206 - - gmx:100778703 741.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03206 06 59231062 59233367 Car06g03206 06 59231062 59233367 ECH