Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03204 ATGAACCAAAAACCATGGTTCTTCCTTTTTCTCCTCACCATCTTCTTCTCTTTCCACACTTACCCTTCACTTTCATCTTTAACCATCATCTCATCAAACCAATCTCTATCTGGTGATCAAACTCTTGTCTCAAAAGATGGAAACTTTGAACTGGGTTTCTTCAATGAAGGTAATTCCTCTAACTACTACATAGGCATGTGGTACAAAAAAGTATCTCAAAGAACATATGTTTGGGTAGCAAATAGAGATCACCCAGTTTCTGATAAAGTTTCTTCCAAGTTAACTATATCAAATGATTCTGGAAATCTTATATTAAGCAATAAGGCCAATGTATCAGAATCAGAAGCTCTTTGGCAGAGTTTTGATTTTCCAACAGATACATGGCTACCTGGTGGAAAAATTAAACTTGATAAAAGAACAAAGAAGCCTCAATATCTTACTGCTTGGAAGAACAAAGAAGATCCAGCAACAGGTTTATTCTCTCTTGAACTAGACCCTAAGGGAACTAATGCGTATTTAATTCTTTGGAATAAAACTCAACAGTATTGGACAAGTGGTTCTTGGAATGGACACATATTTAGTTTGGTTCCTGAAATGAGGTTAAACTACATATACAATTTTGCCTTTCAGTCCAACGAGAACGAAAGCTACTTCACGTATTCCTTGTACAACAATGCTTCGATATCTCGGTTCGTGATGGATATCTCGGGACAGATCAAGCAATTGACTTGGCTTGAAAGTACTCAACAATGGAATTTGTTTTGGTCACAGCCAAGAAGACAGTGTGAGGTTTATGCTTTCTGTGGTGCATTTGGTAGCTGTACTGAGAATTCAATGCCATATTGCACTTGTTTGAATGGTTATGAACCAAAGTCAAGGTCTGATTGGAATCTTGGTGATTTCTCACATGGATGTGTGAAAACAAATAAGTTTCAATGTGAGGTGTCTTCGAATCCTTCGAACGGTGCTAAGGATAGGTTCTTAACTAAATCCAACTTGGCTTTGCCTGAACATGCACAACCTGTTGTTGAAGCTGGTGGTATTGAGGAATcatctgagtttcatgattccaaaagcaataaagggaaaacaattggtgttgttggtgctttacctccaattcctagatccctacaagctTTTGTTGATGACCAAGAAAATATAGTTTTCTTCACTGATTCAAGCTCCACTCATAGTTCACAGGCAAAGAGCAATAGTGTCTCTACAACATCATCTCAAGCCAGAAGCAACATTTCATCTACTAGCACCTAG 1272 0.3514 MNQKPWFFLFLLTIFFSFHTYPSLSSLTIISSNQSLSGDQTLVSKDGNFELGFFNEGNSSNYYIGMWYKKVSQRTYVWVANRDHPVSDKVSSKLTISNDSGNLILSNKANVSESEALWQSFDFPTDTWLPGGKIKLDKRTKKPQYLTAWKNKEDPATGLFSLELDPKGTNAYLILWNKTQQYWTSGSWNGHIFSLVPEMRLNYIYNFAFQSNENESYFTYSLYNNASISRFVMDISGQIKQLTWLESTQQWNLFWSQPRRQCEVYAFCGAFGSCTENSMPYCTCLNGYEPKSRSDWNLGDFSHGCVKTNKFQCEVSSNPSNGAKDRFLTKSNLALPEHAQPVVEAGGIEESSEFHDSKSNKGKTIGVVGALPPIPRSLQAFVDDQENIVFFTDSSSTHSSQAKSNSVSTTSSQARSNISSTST 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03204 423 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 189 IPR036426 -
Car06g03204 423 SMART blect_4 33 124 IPR001480 -
Car06g03204 423 Gene3D - 25 187 IPR036426 -
Car06g03204 423 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 5 110 - -
Car06g03204 423 Pfam S-locus glycoprotein domain 183 292 IPR000858 GO:0048544
Car06g03204 423 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 98 350 - -
Car06g03204 423 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 5 110 - -
Car06g03204 423 MobiDBLite consensus disorder prediction 394 423 - -
Car06g03204 423 ProSiteProfiles Bulb-type lectin domain profile. 27 188 IPR001480 -
Car06g03204 423 Pfam D-mannose binding lectin 99 150 IPR001480 -
Car06g03204 423 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 98 350 - -
Car06g03204 423 CDD B_lectin 33 124 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03204 Car-Chr6 59186815 59189304 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03204 - - gmx:100782119 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03204 06 59186815 59189304 Car06g03204 06 59186815 59189304 ECH