Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03175 ATGAGCCGCTACGATCCAAACCCTTTCGAAGAAGAAGATCTCCACGAAAATCCCTTTGCGGATGGAGTAGCTAAAGGAAAAGGTGGGTCAGGGCAATCAAGTTATGGAGGAGGTGCATTTTACACTACCAATCCTGGAAGTGTTCCTTCTGCGACCTCAAGACTCTCACCCCTTCCTCCCGAGCCTTATGATCGTGGAGCAACTATTGACATCCCTCTTGATGGCTCAAAGGATGTCAAAGCAAAGGAGAAGGAACTTCAAGCCAGAGAGTCTGAATTGAAAAAAAGGGAACAGGAAATAAAACGGAGAGAGGATGCCATAGCACGAGCTGGTATAGTTATAGAGGAAAAAAATTGGCCACCTTTTTTCCCCATCATTCATCATGACATTGGAAATGAAATACCAATACATCTTCAGAGGTTGCAGTATGTTGCATTTACAACATGGTTAGGTTTGGTTCTGTGTCTTTTGTGGAATATAGTGGCAGTTACTACTGCTTGGATCAAAGGAGAAGGTCCTACCATCTGGTTTCTTGCTATTATATATTTTATTTCTGGTGTTCCAGGATCCTATGTAATGTGGTATCGTCCCCTTTATCGCGCTATGAGGACGGACAGTGCTCTGAAGTTTGGCTGGTTTTTTGTGGCTTACATGTTGCACATTGGCTTTTGCATTTTTGCTGCAGTTGCTCCACCGATTATCTTCAAAGGAAAATCTCTCACAGGTATTTTGGCTGCAATTGATGTGATAGGCGGCAGTGCATTGGTTGGGATATTCTACTTTATTGGGTTCGGATTTTTCTGTCTCGAGTCACTGCTGAGCGTCTGGGTTTTTCAGCAAGTATTGATGTACTTCCGTGGAAGTGGCAAGGCTGCAGAGTTAAAGCGAGATGCAGCCAGAGGGACTGTGATGGCAGCTCTATGA 924 0.4426 MSRYDPNPFEEEDLHENPFADGVAKGKGGSGQSSYGGGAFYTTNPGSVPSATSRLSPLPPEPYDRGATIDIPLDGSKDVKAKEKELQARESELKKREQEIKRREDAIARAGIVIEEKNWPPFFPIIHHDIGNEIPIHLQRLQYVAFTTWLGLVLCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGVPGSYVMWYRPLYRAMRTDSALKFGWFFVAYMLHIGFCIFAAVAPPIIFKGKSLTGILAAIDVIGGSALVGIFYFIGFGFFCLESLLSVWVFQQVLMYFRGSGKAAELKRDAARGTVMAAL 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03175 307 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN 1 307 - -
Car06g03175 307 MobiDBLite consensus disorder prediction 1 20 - -
Car06g03175 307 MobiDBLite consensus disorder prediction 35 54 - -
Car06g03175 307 MobiDBLite consensus disorder prediction 1 74 - -
Car06g03175 307 Coils Coil 76 106 - -
Car06g03175 307 Pfam SCAMP family 116 287 IPR007273 GO:0015031|GO:0016021
Car06g03175 307 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 1 307 IPR007273 GO:0015031|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03175 Car-Chr6 58395274 58404599 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03175 3 307 Miscellaneous Gene Families AT1G11180 65.064 1.88e-142 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03175 K19995 - gmx:100796729 541.191