Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03143 ATGTCGGATCGATTCTTTCCCAACCCAATGCCCGAATTCGTACCCGAAGCAACGCCGTCAACTCAACATGAACTACACGAAGCAATCACCGTTACAACCGGTGACTCACTTCACAAGCTCCTCGCCATGCCTCACGCTCCACTCTCCGAGCGTCTCAAACGCGCTGCCTTAGACCTCAAACAAACCATAGTGATGGAAACGTGGGGCTTTACTGAGCAACGCGTTGGTGACTTCACTCTCTATTGTGGACTTCTTGGAACCGCTTTTCTCCTTTTCAAGTCTTACAATGTCACCCAAAATGCAAACGATCTAACACTTTGCTCCCAGATTATCAAGGCTTGTGATACTGCTTCTCTTTATTCTAGGGAGGTGAGTTTTATTTGTGGGCGTGCTGGTGTTTGTGCCCTTGGGGCTGTGGCTGCTAAACATGCTGGTAATGATGAGTCCTTGAGGTACTACTTGGCTCAGTTCCAAAAGATTAAGCTACCAAAGGATCTTCCTGATGAGTTGCTATACGGGAGAGTTGGTTTTCTATGGGCATGTTTGTTCTTAAACAAGCACCTTGGTCAAGGGACTGTTCCCTCTAGTTATACTGCCCCAGTTGTGGATGAAATTATAAAAAATGGAAGGGCGTTGGGACGAAAAGGAAAATGTCCTTTGATGTTTGAGTGGTACGGAGAGAAGTATTGGGGTGCTGCACATGGATTGGTTGGGATTATGCATGTCCTTATGGATATGGAGCTGAAGCCTGATCAGCTTGAGGATGTTAGGGATACTCTTAAATACATGATACTTAACCGCTTTCCTAGTGGAAACTATCCAGCTAGCGAAGGAGATAAGAAGAGGGATGAACTTGTGCATTGGTGCCATGGAGCTCCTGGAGTGGCTCTCACACTTGTCAAAGCATCTAAGGTTTTTGGAGATGAAGAATTCTTGGATGCAGCTATGGAAGCAGCCGATGTGGTTTGGAGTCGCGGTTTGCTCAAGCGAGTTGGAATGTGCCATGGCATCAGTGGGAATGCATATGTCTTCCTGTCACTTTACCAACTTACTGGGAATGCGAAGTATCTATACAAAGCCAAAGCTTTTGCTTGCTTTTTGCTCGATAGAGCTCATAAGTTGATATCTCGAGGTGAAATGCATGGAGGCGATAGACCTTATTCACTGTTTGAAGGTGTGGGAGGTATGGCTTATCTCTTTTTGGACATGGTTGATCCTTCTCAGTCTAAATTTCCTGCTTATGAACTATGA 1251 0.4556 MSDRFFPNPMPEFVPEATPSTQHELHEAITVTTGDSLHKLLAMPHAPLSERLKRAALDLKQTIVMETWGFTEQRVGDFTLYCGLLGTAFLLFKSYNVTQNANDLTLCSQIIKACDTASLYSREVSFICGRAGVCALGAVAAKHAGNDESLRYYLAQFQKIKLPKDLPDELLYGRVGFLWACLFLNKHLGQGTVPSSYTAPVVDEIIKNGRALGRKGKCPLMFEWYGEKYWGAAHGLVGIMHVLMDMELKPDQLEDVRDTLKYMILNRFPSGNYPASEGDKKRDELVHWCHGAPGVALTLVKASKVFGDEEFLDAAMEAADVVWSRGLLKRVGMCHGISGNAYVFLSLYQLTGNAKYLYKAKAFACFLLDRAHKLISRGEMHGGDRPYSLFEGVGGMAYLFLDMVDPSQSKFPAYEL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03143 416 Gene3D - 1 416 IPR012341 GO:0005975
Car06g03143 416 PRINTS Eukaryotic LanC-like protein family signature 2 15 IPR020464 -
Car06g03143 416 PRINTS Eukaryotic LanC-like protein family signature 218 230 IPR020464 -
Car06g03143 416 PRINTS Eukaryotic LanC-like protein family signature 264 279 IPR020464 -
Car06g03143 416 PRINTS Eukaryotic LanC-like protein family signature 302 323 IPR020464 -
Car06g03143 416 PRINTS Eukaryotic LanC-like protein family signature 347 365 IPR020464 -
Car06g03143 416 PANTHER LANC-LIKE PROTEIN 1 416 - -
Car06g03143 416 SMART LANC_like_2 74 416 IPR007822 -
Car06g03143 416 CDD euk_LANCL 80 412 - -
Car06g03143 416 PANTHER LANC-LIKE PROTEIN GCL2 1 416 - -
Car06g03143 416 Pfam Lanthionine synthetase C-like protein 76 416 IPR007822 -
Car06g03143 416 PRINTS LanC-like protein superfamily signature 77 95 IPR007822 -
Car06g03143 416 PRINTS LanC-like protein superfamily signature 168 183 IPR007822 -
Car06g03143 416 PRINTS LanC-like protein superfamily signature 229 245 IPR007822 -
Car06g03143 416 PRINTS LanC-like protein superfamily signature 285 305 IPR007822 -
Car06g03143 416 PRINTS LanC-like protein superfamily signature 331 344 IPR007822 -
Car06g03143 416 PRINTS LanC-like protein superfamily signature 386 403 IPR007822 -
Car06g03143 416 SUPERFAMILY LanC-like 69 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03143 Car-Chr6 57493689 57497050 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03143 - - mtr:MTR_6g007490 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03143 06 57493689 57497050 Car06g03143 06 57493689 57497050 ECH