Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03122 ATGTTGAGACGCACAATAGCTTCTTTGAAATCATCTATTTCCCTTCACATCACGGAGGAAAAGGATAGGATTTGTCCCAAGCATATAGATTCGGTTATAACTTTTGTTTTAGGAGGCCCTGGTAGTGGAAAAGGTACACAATGTGCAAAAATTGTTGAAACCTTTGGATTTAAGCATCTGAGTGCTGGTGACCTGTTGAGGAAGGAGATAGTTTCTGATAGTGAATATGGCTCGATGATTCTGGATACAATTAGGGAAGGAAAAATTGTTCCATCAGAAGTGACTGTGAAATTGATTCTAAGAGAGTTGGAATCTGGTGACAATCATAAGTTTCTTATCGATGGTTTCCCTAGAAGTGAGGAGAACCGCATAGCTTTTGAACATATTACTGGATCTGAACCAAATTTTGTTCTTTTCTTTGATTGCCCTGAAGAAGAGATGGTGAAACGGGTGCTGAGCCGTAATCAGGGTCGAATTGATGACAATATAGATACAATCAAGAAACGTCTTAAAGTATTTGAGTCATTAAATCTTCCTGTGATAGATTATTATGCAAAGAAAGGGAAACTACACAGGATCAATGCTGTGGGAACAGAGGATGAAATATTTGAGCAAGTTCGGCCAGTTTTTGCGGCATGTGAGAAGAAGGCTACTATTACATGA 663 0.3876 MLRRTIASLKSSISLHITEEKDRICPKHIDSVITFVLGGPGSGKGTQCAKIVETFGFKHLSAGDLLRKEIVSDSEYGSMILDTIREGKIVPSEVTVKLILRELESGDNHKFLIDGFPRSEENRIAFEHITGSEPNFVLFFDCPEEEMVKRVLSRNQGRIDDNIDTIKKRLKVFESLNLPVIDYYAKKGKLHRINAVGTEDEIFEQVRPVFAACEKKATIT 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03122 220 PANTHER UMP-CMP KINASE 29 211 - -
Car06g03122 220 ProSitePatterns Adenylate kinase signature. 111 122 IPR033690 -
Car06g03122 220 PRINTS Adenylate kinase signature 35 48 IPR000850 GO:0005524|GO:0006139|GO:0019205
Car06g03122 220 PRINTS Adenylate kinase signature 63 77 IPR000850 GO:0005524|GO:0006139|GO:0019205
Car06g03122 220 PRINTS Adenylate kinase signature 111 127 IPR000850 GO:0005524|GO:0006139|GO:0019205
Car06g03122 220 PRINTS Adenylate kinase signature 158 173 IPR000850 GO:0005524|GO:0006139|GO:0019205
Car06g03122 220 PRINTS Adenylate kinase signature 175 189 IPR000850 GO:0005524|GO:0006139|GO:0019205
Car06g03122 220 Hamap UMP-CMP kinase [CMPK1]. 31 213 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Car06g03122 220 CDD ADK 35 202 IPR000850 GO:0005524|GO:0006139|GO:0019205
Car06g03122 220 PANTHER NUCLEOTIDE KINASE 29 211 IPR000850 GO:0005524|GO:0006139|GO:0019205
Car06g03122 220 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 210 IPR027417 -
Car06g03122 220 TIGRFAM UMP_CMP_kin_fam: UMP-CMP kinase family 33 210 IPR006266 GO:0004127|GO:0006207|GO:0006221|GO:0009041
Car06g03122 220 Hamap Adenylate kinase [adk]. 32 211 IPR000850 GO:0005524|GO:0006139|GO:0019205
Car06g03122 220 Pfam Adenylate kinase 36 188 - -
Car06g03122 220 Gene3D - 30 212 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03122 Car-Chr6 56626640 56632599 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03122 K13800 - gmx:100806842 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03122 06 56626640 56632599 Car06g03122 06 56626640 56632599 ECH