Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03116 ATGGGTTTGGATCAAAGGTTAAGGTTGATGAAGATGATCATGATAATGGTTTGTGCTCTTTTGGGTGTAACTCAAAGAAGCATGAGTTGGCAGCATAATTATGGGGAAGCATTGTCAAAGAGCATATTGTTCTTTGAAGGGCAGAGGTCAGGGAAGTTACCACCAACACAAAGAATGACTTGGAGGAAGGATTCTGCATTTGAAGATGGATTTCAACTTGATGATGATCGATTCTTTGATAAAGTTGACTTAATTGGCGGTTACTATGATGCGGGTGACAATGTGAAATTCAATTTCCCAATGGCATTTTCAACAACAATGCTGGCTTGGAGTGTTATAGAGTTTGGAAAATTCATGGGCCAAGACCTTAACCATGCATTAGATGCTATAGGTTGGGCCACAGATTATTTACTTAAATCCACAAATATCCCAGGAGTTGTGTTTGCACAAGTTGGTGACCCACATGGTGATCATAATTGTTGGGAGAGACCGGAAGATATGGACACTCCTAGAACAACATTTTTTGTTAGTAGAGAGAATCCTGGATCTGAAGTTTCAGCTGAAATTGCAGCAGCACTTGCAGCCTCTTCTATTGTATTTAGGAAATACCATAATGTTGAATATTCTGAAAGGCTTCTTCAAAGGGCTATAATGGTTTTTGACTTTGCAGATAAATACAGAGGATCATACAATGACAGCCTTGGTTCGTATGTATGCCCATTCTATTGTGATTTTAGTGGCTACCAGGACGAATTGGTGTGGGGAGCAGCATGGTTACTCAAGGCTACTAATCTTCCAAATTACTGGAATTACATTAAACAAAATATTCACAATGTGAAAAACTTTGGTGAATTTGGATGGGACTCAAAGGATGCTGGCATCAACGTTCTAGTTTCTAAGCTTCTAGTTAATAATCCAGCTTCTAAGCCTTTTACCCTTAATGCTGACAAGTTTATCTGTGCTGTGCTACCTGAATCACCCTTAATTTCAGTCTCATACTCTCGAGGTGGGCTTCTATTTAAGTCTGGTGGGAGTAACATGCAACACGCAACAGCTTACTCATTCCTTTTAATGGTTTATGCTGGATATTTAAATAAAGCAAATAAAAAGATTGACTGTGGTGGTGGAGTTTTTGCTTCTTCAAGGAGACTTAAACAAGTAGCAAAAAGCCAGGTAGATTACATACTAGGAAACAACCCATTGAATATGTCATACATGGTTGGATATGGATCAAAATTTCCTAAAAGAATACATCATCGTGCATCATCCTTACCTTCAATTGACCAACATCCTAATCAAATCGATTGCAAAGGAGGTTCCTCTTATTTTGAAACCCAAAATCCAAATCCCAATCTGCTTTTAGGAGCTATTGTTGGAGGACCTAATATCAATGATGAGTATGTTGATTCTAGAGCAGATTTTGTACACTCAGAACCTACAACATACATCAATGCACCTCTTGTGGGTGTTTTGGCTTACTTTAAATCACATCCATACTAA 1500 0.384 MGLDQRLRLMKMIMIMVCALLGVTQRSMSWQHNYGEALSKSILFFEGQRSGKLPPTQRMTWRKDSAFEDGFQLDDDRFFDKVDLIGGYYDAGDNVKFNFPMAFSTTMLAWSVIEFGKFMGQDLNHALDAIGWATDYLLKSTNIPGVVFAQVGDPHGDHNCWERPEDMDTPRTTFFVSRENPGSEVSAEIAAALAASSIVFRKYHNVEYSERLLQRAIMVFDFADKYRGSYNDSLGSYVCPFYCDFSGYQDELVWGAAWLLKATNLPNYWNYIKQNIHNVKNFGEFGWDSKDAGINVLVSKLLVNNPASKPFTLNADKFICAVLPESPLISVSYSRGGLLFKSGGSNMQHATAYSFLLMVYAGYLNKANKKIDCGGGVFASSRRLKQVAKSQVDYILGNNPLNMSYMVGYGSKFPKRIHHRASSLPSIDQHPNQIDCKGGSSYFETQNPNPNLLLGAIVGGPNINDEYVDSRADFVHSEPTTYINAPLVGVLAYFKSHPY 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03116 499 Pfam Glycosyl hydrolase family 9 34 491 IPR001701 GO:0004553|GO:0005975
Car06g03116 499 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 467 485 IPR033126 -
Car06g03116 499 PANTHER ENDO-1,4-BETA-GLUCANASE 15 498 - -
Car06g03116 499 Gene3D - 29 498 IPR012341 GO:0005975
Car06g03116 499 PANTHER ENDOGLUCANASE 15 498 - -
Car06g03116 499 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 394 420 IPR018221 -
Car06g03116 499 SUPERFAMILY Six-hairpin glycosidases 17 495 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03116 Car-Chr6 56406736 56415042 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g03116 15 497 Glycoside Hydrolase AT1G70710 59.426 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03116 K01179 - gmx:100775752 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03116 06 56406736 56415042 Car06g03116 06 56406736 56415042 ECH