Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03096 ATGTCGTTTTCATCGGAGAATCAGATTCAGACTCAGAAAGAAAACCCTAACCCTAATATCAGTTCTTTATTGAAGAAGAGAGTACCTAGATGGTCTGATATATGGGTAAAGCACACCAAATCGAAACCCCTTAACCAAATTGTTGCTGCTGCTACAGCAATGCAAATGCAGCTTCAATCTCTTTCTCCTTCTCACAAATCACACAACAACACATTAATCCCTAATTTCTCAATCATCGATCAAACTCTTTTGTTATCTGACGAAATGCTTCTCAAGATTCTATCTAAGCTTCCAGATTCTCAGAGAAATTCAAATTCACTCGTTTGTAAACGTTGGCTCAATCTCCAAGGTCGTCTCGTACGTAAAATTAGGATCCTCGATTGGAACTTTCTTTTATCTGGTAGGTTGATTCATAGATTCCCTAATCTTAATCATGTTGATTTGGTTCCTGGGTCATTGATTTTAACTAAAAGTTCGAATATTTTGACGAGCAATAACGTTTTGTGTATGAATGTGGATTCGGCGTGTTCGCCGAATTGGTTTTTATGTGAGGATAATATGCTTCCTGTTGAGGTTATTGATAATGGGTTAAGTGCTTTAGCTAGTGGGTGTCCTAATTTGAGAAGGGTTCAAGTGATTGGTGCTAGTGAAATGGGTTTGCTTAGTGTGGCTGAAGAGTGTCCTACATTGCAGGAATTGGAACTTCAGAGTTGTAGCGATAATGTTTTGCGTGGGATAGCCGCATGTGTGAATTTGCAGATTTTGAAATTGGTTGGGAATGTTGATGGTTTTTATGGTTCTGTTGTTTCTGATATTGGGTTGACTATTTTGGCTCAGGGTTGTAAGAGGCTTGTGAAGCTTGAGCTTTGTGGTTGTGAAGGGAGTTTTGATGGGATTAAGGCTATTGGTAAGTGTTGTCAAATGTTGGAGGAGTTGACATTGTGTGATCATAggatggatgatggatggatggctgCGGTTTCGTATTGCGAGAATTTGAAGACGTTGAGGTTAATGTCTTGTAAGAAGATTGATTTGAATCCAGGACTCGAAGAGTACTTGGGTTCTTGTCCTGCACTTGAAAGGTTGCATTTACAAAAGTGTCAGCTGCGGGATAAGAAGAGTGTATCTGCTTTGTTTTCTGTTTGCAGGAATGCTAAGGAGATTATTATTCAGGATTGCTGGGGATTCGATAATGGCATGTTCAACTTTGCTAATGTTTGCAGGCGTGTAAAATTGCTTTACATAGAAGGATGCTCATTACTAACAACAGAAGGGTTGGAATCTGTAATACATTCATGGAAGGATCTTCAAAGCCTTAGAGTAGTGTCATGTAAGAATATAAAAGATAGTGAAATCTCTCCTGCACTTGCAACCTTATTTACCAGTCTCAAAGAATTGAAATGGAGGCCAGATACCAAATCACTTCTTCAATCAAGTCTTGTTGGGATAAGTATTGGAAAGAAAGGTGGCAAATTTTTTAAAAAGACATGA 1494 0.3788 MSFSSENQIQTQKENPNPNISSLLKKRVPRWSDIWVKHTKSKPLNQIVAAATAMQMQLQSLSPSHKSHNNTLIPNFSIIDQTLLLSDEMLLKILSKLPDSQRNSNSLVCKRWLNLQGRLVRKIRILDWNFLLSGRLIHRFPNLNHVDLVPGSLILTKSSNILTSNNVLCMNVDSACSPNWFLCEDNMLPVEVIDNGLSALASGCPNLRRVQVIGASEMGLLSVAEECPTLQELELQSCSDNVLRGIAACVNLQILKLVGNVDGFYGSVVSDIGLTILAQGCKRLVKLELCGCEGSFDGIKAIGKCCQMLEELTLCDHRMDDGWMAAVSYCENLKTLRLMSCKKIDLNPGLEEYLGSCPALERLHLQKCQLRDKKSVSALFSVCRNAKEIIIQDCWGFDNGMFNFANVCRRVKLLYIEGCSLLTTEGLESVIHSWKDLQSLRVVSCKNIKDSEISPALATLFTSLKELKWRPDTKSLLQSSLVGISIGKKGGKFFKKT 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03096 497 Gene3D - 81 118 - -
Car06g03096 497 SMART LRR_CC_2 357 382 IPR006553 -
Car06g03096 497 SMART LRR_CC_2 408 433 IPR006553 -
Car06g03096 497 SMART LRR_CC_2 281 305 IPR006553 -
Car06g03096 497 SMART LRR_CC_2 227 249 IPR006553 -
Car06g03096 497 PANTHER UNCHARACTERIZED 62 478 - -
Car06g03096 497 SUPERFAMILY RNI-like 127 260 - -
Car06g03096 497 PANTHER F-BOX PLANT-LIKE PROTEIN 62 478 - -
Car06g03096 497 MobiDBLite consensus disorder prediction 1 22 - -
Car06g03096 497 Gene3D Ribonuclease Inhibitor 373 476 IPR032675 -
Car06g03096 497 Gene3D Ribonuclease Inhibitor 214 372 IPR032675 -
Car06g03096 497 SUPERFAMILY F-box domain 82 133 IPR036047 GO:0005515
Car06g03096 497 SUPERFAMILY RNI-like 266 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03096 Car-Chr6 55565684 55568298 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03096 K10268 - gmx:100812193 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03096 06 55565684 55568298 Car06g03096 06 55565684 55568298 ECH