Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03083 ATGAAGATGAAGTTTTCAGGGTATTCAGTTTCTGTTTCATTTTCTCCTATGAGTTCCAATTTCATCAAAGGTAGTTGTAGATTTCCGGCGAGTATATTTCGAAGAAACCGTAGAAATTTACGCAGTTCAAGGTTCTTTTCTGTGAAACAAGAAGCATATGATAAACATGGGGTGGTTGCCAAACACTATCTTCCTCCTTGGTTTAGTGTTGCTCCAATGATGGACTGGACAGATAATCACTATAGGACTCTAGCCCGCCTCATATCAAAGCATGCTTGGCTGTACACCGAGATGCTTGCAGCTGAAACCATTGTTCATCAAAAGGATAATCTGGACAGATTCTTAGCATATTCTCCAGAACAACATCCCATTGTGCTACAAATTGGAGGGGGTAATGTAGAAAATTTGGCAAAAGCAACCGAACTTGCTAATGCTTATTGCTATGATGAGATCAATTTAAACTGTGGATGCCCTAGTCCTAGAGTAGCTGGACATGGGTGCTTTGGTGTGCGTCTTATGCTTGACCCAAAGTTTGTTGCCGAGGCTATGTCTGCAATTGCTGCAAACACAAATGTACCTGTCAGTGTCAAATGTCGAATTGGTGTGGACGATCATGATTCTTACGATGAACTGTGTGATTTCATATTCAAGGTTTCTTCTCTATCACCCACTAAGCATTTCATAATTCACTCAAGGAAGGCGCTGCTCAACGGCATTAGCCCAGCTGAAAATAGAAGTATTCCTCCACTGAAGTATGAATACTTTTATGGCCTTTTACGCGACTTTCCAGATTTAACATTTACTATAAATGGGGGTATTGCTAGTATTGATGAGGTCAATGCAGCACGAGAAGCTGGGGCTCATGGTGTTATGATTGGACGTGCAGCATACAATAACCCTTGGCATATATTGGGACATGTTGATACTGCAATTTACGGTGCACCGAGCTGTGGTCTTACTCGTCGTCAGGTTCTTGAAAAATATATAGTCTACGGGGACTCGATGTTGGGCAAATACGGACATAAGCCTACTGTACGAGACATTGTGAAGCCTTTACTCAATCTTTTCCATTCAGCGCCCGGGAATGGACTTTGGAAGCGCAATGCGGATGCTGCTTTCCGAAATTGCACGACAATAAAATCTTTTTTTGAAGAAACACTTGTAGCAATTCCTGACTCGGTATTGGATTCGCCTATTTCGGAACCATCTCCTGGCAGCAGAGATCTGTTTGCTAATATAGACAGTTTACTGCCTCCTCCATACCAAACAAGAGAAGAGGCTATTATATGCGCATAG 1296 0.4213 MKMKFSGYSVSVSFSPMSSNFIKGSCRFPASIFRRNRRNLRSSRFFSVKQEAYDKHGVVAKHYLPPWFSVAPMMDWTDNHYRTLARLISKHAWLYTEMLAAETIVHQKDNLDRFLAYSPEQHPIVLQIGGGNVENLAKATELANAYCYDEINLNCGCPSPRVAGHGCFGVRLMLDPKFVAEAMSAIAANTNVPVSVKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYFYGLLRDFPDLTFTINGGIASIDEVNAAREAGAHGVMIGRAAYNNPWHILGHVDTAIYGAPSCGLTRRQVLEKYIVYGDSMLGKYGHKPTVRDIVKPLLNLFHSAPGNGLWKRNADAAFRNCTTIKSFFEETLVAIPDSVLDSPISEPSPGSRDLFANIDSLLPPPYQTREEAIICA 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03083 431 SUPERFAMILY FMN-linked oxidoreductases 67 367 - -
Car06g03083 431 CDD DUS_like_FMN 68 301 IPR035587 -
Car06g03083 431 Pfam Dihydrouridine synthase (Dus) 70 376 IPR035587 -
Car06g03083 431 PANTHER FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEIN 59 429 IPR004653 GO:0002943|GO:0017150
Car06g03083 431 Gene3D - 318 375 - -
Car06g03083 431 PANTHER TRNA-DIHYDROURIDINE SYNTHASE 59 429 - -
Car06g03083 431 Gene3D Aldolase class I 64 306 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03083 Car-Chr6 54895134 54901191 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03083 K05539 - gmx:100779457 721.85