Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03066 ATGGCAAACATTTTGAAGAGCAGCAGTGGTGTTATCCTCTCGTCTTTCTCTTCACGCACCACTACACTCTCACGAATAACAACAACAACCCATTACTCATTTCTTCGCAAGTTCCCTTTTTTTTCACTCTCATCTTCCTCACGCGCCAAAACCCTATCTGGGTTCCCTTCATTTTGCACTCTTTCTTCTGATACAGTGACGGAATCCATAGTGAGTGAAAGCAATGTCAAAGGTGAAAATGACAAGAGTCTTATTAAGGATGCTGCTGGGTTGCTTGATATAAGGGTTGGTCGTATTGTGAGGGCATGGAAACATGATGAAGCTGAATCTCTTTATGTTGAAGAAGTTGATATTGGTGAGCCTGAACCTAGAATTATATGTAGTGGCCTTGTCAATTACATTCCTCTTGAACAACTTCAGGGCAAAAAAGTTATTGTTCTTTCAAATCTGAAGCCAAGGAATATGCACGGTGTCAAGTCTAGTGGAATGTTGATGGCTGCTTCTGATTCAAAGCACGAGAATGTTGAACTTCTGTTCCCTCCTGAAGAAGCAAATCCTGGTGAAAGAATATGGTTTGGGTCTGAAGATGAAAAGGACAATCAACCTGCTGCTGCTGCTCCAAATCAGGCAATAATACATACAGAAAAACTTGAATATATACATCTGTCTATAGGATGGGGATCAACTTCTACTATACAAAAGAAAAAGATATGGGAATTGGTGCAGCCTCATCTTAAGACAGATGTTTCTTGTACTGCAATGCTAGGTGAGCTTGTCATGCGTACATCTGTAGGTTCAGTGGCATGCCAATCTTTGCAGAATGCAAATATTTCTTGA 837 0.4062 MANILKSSSGVILSSFSSRTTTLSRITTTTHYSFLRKFPFFSLSSSSRAKTLSGFPSFCTLSSDTVTESIVSESNVKGENDKSLIKDAAGLLDIRVGRIVRAWKHDEAESLYVEEVDIGEPEPRIICSGLVNYIPLEQLQGKKVIVLSNLKPRNMHGVKSSGMLMAASDSKHENVELLFPPEEANPGERIWFGSEDEKDNQPAAAAPNQAIIHTEKLEYIHLSIGWGSTSTIQKKKIWELVQPHLKTDVSCTAMLGELVMRTSVGSVACQSLQNANIS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03066 278 CDD tRNA_bind_EMAP-II_like 91 191 - -
Car06g03066 278 Pfam Putative tRNA binding domain 94 189 IPR002547 GO:0000049
Car06g03066 278 Gene3D - 88 278 IPR012340 -
Car06g03066 278 SUPERFAMILY Nucleic acid-binding proteins 88 275 IPR012340 -
Car06g03066 278 PANTHER TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER 230 278 - -
Car06g03066 278 PANTHER TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER 78 209 - -
Car06g03066 278 PANTHER TYROSINE--TRNA LIGASE, CYTOPLASMIC 230 278 - -
Car06g03066 278 PANTHER TYROSINE--TRNA LIGASE, CYTOPLASMIC 78 209 - -
Car06g03066 278 ProSiteProfiles tRNA-binding domain profile. 88 191 IPR002547 GO:0000049
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03066 Car-Chr6 53517591 53526667 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03066 - - var:108338794 313.153