Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03063 ATGGCTTCATCTACGACTTCATCATCCCTTATGTTAACCCACTCTACTTCCACCATCATCAACTCACAAGACTACTCTTCCTCACACCGTTCCTTCCCTCTCAGACCTCTTTCTAGAACCTTCTTTCTCTCCCCCCTCGTTTTAAAGTCCTCCAACTTGTTCCATTGCAGTTACCAATCTAGGTCTTCTTCTCATTGCTTCGCTGCTTCCCTCGCCGCCGATGTCGCCGAAACCGATGAGGAGGAAAATGACAGTGCTGATGATGAGTCTTCCAATGCCACTAATACTCTTGTTGTCTCTACTAAGCCTAAGACTGGGAAGGCTGCATTGCTTCTCAAGAGCGACAGGGTAAGGTCTAAGAGGTTCTTGGAAATTCAAAAATTGAGGGAGCATAAGAAAGAGTATGACTTGAAGACAGCAATTTCTTTGGTAAAAGCATCAGCTAAAGCCAAGTTTGTAGAAACAGTAGAAGCCCATTTCCGCCTCAACATTGACCCTAAGTATAATGATCAACAGTTAAGAGCAACAGTAAGTCTGCCAAAGGGAACTGGAAAGACTGTTAAAGTGGCTGTTCTTACTCAAGGTGAGAAATTCGACGAAGCTAAAAACGCAGGAGCTGATTTGGTGGGTGGAGAAGACCTGATAGAACAGATAAAAGGAGGATTCATGGAATTTGATAAATTAATTGCTTCTCCAGATATGATGCCTAAGGTTGCTATCCTAGGGAAAATTTTGGGGCCAAGAGGACTCATGCCAAATCCAAAGGCTGGCACTGTAACAGCTAATATTCCTCAGGCTATAGCAGAATTCAAGCAGGGAAAAGTTGAATACAGGGCAGATAAAACTGGAATCGTGCACTTGCCGTTTGGAAAAGCCGACTTTCTGGAAGAGGATCTTCTTACAAACTTGCTTGCAGCAATAAAATCAGTAGAGACAAACAAACCTTCGGGTGCGAAAGACTTCAATCAGAATAGAGCACCTGGTCTTTGA 990 0.4354 MASSTTSSSLMLTHSTSTIINSQDYSSSHRSFPLRPLSRTFFLSPLVLKSSNLFHCSYQSRSSSHCFAASLAADVAETDEEENDSADDESSNATNTLVVSTKPKTGKAALLLKSDRVRSKRFLEIQKLREHKKEYDLKTAISLVKASAKAKFVETVEAHFRLNIDPKYNDQQLRATVSLPKGTGKTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVAILGKILGPRGLMPNPKAGTVTANIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFLEEDLLTNLLAAIKSVETNKPSGAKDFNQNRAPGL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03063 329 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN, LARGE 132 318 - -
Car06g03063 329 Gene3D - 182 273 IPR016095 -
Car06g03063 329 SUPERFAMILY Ribosomal protein L1 121 321 IPR023674 -
Car06g03063 329 CDD Ribosomal_L1 137 316 IPR028364 -
Car06g03063 329 Pfam Ribosomal protein L1p/L10e family 145 320 IPR028364 -
Car06g03063 329 Hamap 50S ribosomal protein L1 [rplA]. 115 326 IPR005878 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Car06g03063 329 Gene3D - 135 320 - -
Car06g03063 329 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 132 318 - -
Car06g03063 329 TIGRFAM rplA_bact: ribosomal protein uL1 118 319 IPR005878 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Car06g03063 329 ProSitePatterns Ribosomal protein L1 signature. 235 253 IPR023673 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03063 Car-Chr6 53493818 53501052 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03063 K02863 - gmx:100808549 437.573