Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03035 ATGAATTCAGATCGTCTAAGTAACTACATAGATGTGAAAAAGGGTATAGTGGTAGAGAAGGATCACCTATGTTTTAGTGATGCTAAAGATATTATGGAGCTTCTTGAGGCCTCACATTTGGGCTTAGAAGGTGAGCAAATCTTGGATGAACTCAAAAAATTAGCAACAACTTGGCTCAAAGATTGTTTCACTTCAAGTGCTATCAACATAAAAGAGTTTAACGTTGATGTTGAAAGAGTGGTCCATGCGTTGGAGCTCCCTTCCCATTGGAGAGTGCCATGGTTTGGTGTGAAATGGCACGTGAAGCATTTCCAAACTGAGAAAGACATGGACCCTGATTTGCTTGAATTAGCAAAATTAAACTTTAACATAACGCAGGTCAAACTTCAAAGGGAGGTCAAGGAATTGTCCAGGTGGTGGGAGAAACTTGGATTAAAAAAAGACTTCAACTTTTCACGAAATAGGTTGGTTGAAAGCTTCATGTGTGCAACAGGGGTTGCTTTTGAGCCCAAATATAAATCTTTGAGGAAATGGCTGACTAAAGTGATTATTTTGGTACTATTGATAGATGATGTTTATGACATATACGCCTCTTTTGAAGAACTCAAGCCGTTTACAACGGCATTAATTCAGAGATGGGATGCAAAAGAACTTGAACTTCCAGAGTACATGACAATTTGCTTCAATGCACTTCAAGATGTCACAAATGAAATTGCATATGAAATTGCAGGAGAAAATAATTATAATATGGTGTTACCTTACCTAAAGAAGGCGTGGATGGAGTTTTGCAATGCGTTATACGTGGAAGCAAAGTGGGACAAAACGGGATATATTCCATCGTTGGAAGAATATCTAAGCAATGCATGGATTACATCTTCGGGGCCATTAATTTTGCTTCATTCATATTTTGCCACAACGTATGAATTTCAGTTAACAGATGAGATTGATAATTTTTCACACATATATCAAGATCTTGTCTACAATGTATCTCTCGTTATTCGGTTGTGCAATGATCTGGGGACCGCAGAGGCCGAAAGCGAAAGGGGAGATACTGCTTCGTCAATTGCATGCTATATGAATGAAAATGATGTTTCAGAGGAAGAAGCAAGAAAACATATCCAAGACATTATAAACAGTGCATGGAAAAAGATTAATGGACAATGCTCCACAAGACTAGTGGCTTCAATGGAACCATTTCTTAATCAAGCCAGAAATGCAGCACGTGTGGCCCACACACTTTATCTAAATGGCGATGGGTTTGGTATTCAAGATCGAGATATCAAAAAACACATTTTATCACTACTTGTTGAACCCTTCTAG 1320 0.3833 MNSDRLSNYIDVKKGIVVEKDHLCFSDAKDIMELLEASHLGLEGEQILDELKKLATTWLKDCFTSSAINIKEFNVDVERVVHALELPSHWRVPWFGVKWHVKHFQTEKDMDPDLLELAKLNFNITQVKLQREVKELSRWWEKLGLKKDFNFSRNRLVESFMCATGVAFEPKYKSLRKWLTKVIILVLLIDDVYDIYASFEELKPFTTALIQRWDAKELELPEYMTICFNALQDVTNEIAYEIAGENNYNMVLPYLKKAWMEFCNALYVEAKWDKTGYIPSLEEYLSNAWITSSGPLILLHSYFATTYEFQLTDEIDNFSHIYQDLVYNVSLVIRLCNDLGTAEAESERGDTASSIACYMNENDVSEEEARKHIQDIINSAWKKINGQCSTRLVASMEPFLNQARNAARVAHTLYLNGDGFGIQDRDIKKHILSLLVEPF 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03035 439 Gene3D Farnesyl Diphosphate Synthase 125 439 IPR008949 -
Car06g03035 439 SFLD Terpene Cyclase Like 1 C Terminal Domain 112 439 IPR034741 -
Car06g03035 439 SFLD Isoprenoid Synthase Type I 112 439 - -
Car06g03035 439 PANTHER OS04G0344100 PROTEIN-RELATED 24 439 - -
Car06g03035 439 SUPERFAMILY Terpenoid synthases 110 439 IPR008949 -
Car06g03035 439 Gene3D - 1 124 IPR036965 GO:0010333|GO:0016829
Car06g03035 439 Pfam Terpene synthase family, metal binding domain 115 383 IPR005630 GO:0000287|GO:0010333|GO:0016829
Car06g03035 439 PANTHER ALPHA-FARNESENE SYNTHASE 24 439 - -
Car06g03035 439 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 22 110 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03035 Car-Chr6 52596226 52599577 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03035 K14173 - gmx:100812119 612.838