Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g03013 ATGCTCTATACACACTTTACTCCCAAACAATCTTCTCTTGCAATCTCAATGGCATCCTCACTTACACTCAAGCGCTTTCTCTCCTCCGCCCTCCTCTCTAAATCTCTTCTTCGCCCAGTTGCTTCTTCCGCTTCCCGCTCTTTCAACACCAACGCCGTCAGCCAGTATGATGATGAACGCAATGTCGACGTTGATCGTCGCTCTGATCGCTCTTTTCCTCACATTCGCCGCGATGATCTCTTCTCAGGTAATGTGTTCGATACATTTTCCCCAACTCGGAGTCTGAGCCAAGTCCTAAACATGATGGATCAATTAACGGACAATCCATTCCTCTCCGCTTCGCGTGGAATCGGAGCCGGTGGAGTTCGACGCGGGTGGGATGCTAAAGAAACAGAGGATGCTCTGCTTCTCCGTCTGGATATGCCTGGACTCGGCAAGGAAGATGTGAAGATCTCTGTGGAACAGAACACTCTAACTATTAAAGGTAAAAGTGCAAAAGAAAGTGATGAGGAGGAAGAAAGTGTTCGTAGATTCTCTAGTAGAATTGATTTGCCTGAGAAGCTTTACAAGATTGATAACATTAAAGCTGAGATGAAAAACGGTGTGCTTAAGGTTACTGTGCCTAAAATTAAGGAAGAGGAAAGGAACGATGTGATTAATGTTAACGTCGAGTAG 675 0.4563 MLYTHFTPKQSSLAISMASSLTLKRFLSSALLSKSLLRPVASSASRSFNTNAVSQYDDERNVDVDRRSDRSFPHIRRDDLFSGNVFDTFSPTRSLSQVLNMMDQLTDNPFLSASRGIGAGGVRRGWDAKETEDALLLRLDMPGLGKEDVKISVEQNTLTIKGKSAKESDEEEESVRRFSSRIDLPEKLYKIDNIKAEMKNGVLKVTVPKIKEEERNDVINVNVE 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g03013 224 Gene3D - 80 223 IPR008978 -
Car06g03013 224 CDD ACD_sHsps-like 127 209 - -
Car06g03013 224 Pfam Hsp20/alpha crystallin family 127 223 IPR002068 -
Car06g03013 224 SUPERFAMILY HSP20-like chaperones 104 215 IPR008978 -
Car06g03013 224 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 117 224 IPR002068 -
Car06g03013 224 PANTHER 23.6 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 17 223 - -
Car06g03013 224 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 17 223 IPR044656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g03013 Car-Chr6 51634117 51635482 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g03013 K13993 - gmx:547852 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g03013 06 51634117 51635482 Car06g03013 06 51634117 51635482 ECH