Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02998 ATGAAGAGAACGGTAGAAAATGAGGTTGTGATTGTTGGAGGTGGTATATGCGGCCTTGCAACAGCCCTCGCCCTTCATAGGAAGAGAATTAGAAGTTTGGTGTTAGAAAAATCAGAGAAGTTACGTGCTACAGGAGCAGCTATAATTGTTCAAGCTAATGGTTGGCATGCCCTTGATCAGCTTGGTATTGGTTCAACACTTAGACAAACTGCCATTGCAATACAAAGAGGAATGTTCACATCACTTAGCGAGAAGGAGCCAAAGGAATTAGCATTTGGGATTAATCAAGAATTTCGGTGCTTAAAGCGCACTGATTTGATCAAAGCCATAGCCAATTGTTTGCCTATGGAAACTATAAGGACTGGTTGTGAAGTACTTTCCATAGAATTAGATCCAGTAACAAGGTATCCACACCTTATGCTTAGCAATGGAACTATCCTTCAAGCCAAGGTTGTAATTGGATGTGATGGAGTGAATTCTACCATTGCAAATATGGTTGGGCTACACCAAACGAAGCTATTGCGTTTCTCTACATGTGTTGCTCGTGGCTTCACAAAGTACCCAAATGGTCATCAATTTGCTAGTGAGTTTGCTCTGATTAGTAGAGGTCAAATCCAACTCGGAAGGATCCCAGTCACTCACAACCTTGTTTACTGGTTTCTAACGAGACCCACCACTTCTCAAGATTCAATAATTTCAAAAGATCTACCTCTTATTAGACAATCATTAGTAGAATCAATGGAGGGTTTCCCAATACTTACAATAGACATGATACGTAGTTGCAAGTTGAACTCTTTGCATCTCACATATGACTTGAAGTATCGACCACCATGGGATTTGCTACTTAACAACTTCAAAAAAGGTACAATTGTAGTTGCTGGTGATGCAATGCATGCCACTGGTCCATTCATTGCACAGGGTGGCTCAGCTTCCATTGAAGATGCAATTGTTCTTGCTAGATGTCTAGCACAAAAGATGCACAATTCAACAAAGGTGATAATAGACCACAATGTTATTGAAGAAGCATTTGACAAATATGTTAAAGAAAGAAAAATGAGAATCTTTTGGCTCTCTTTACATACTTTCCTTGTTGGGAAGAAACTTGATACAAAATCATTGATGGTCAGAGCTGTATTCCTTGCAATCATGTTTGTTCTATTTAGAGATCCAGACTGCCATTCACGGTATAACTGCGGAACTTTACATCATGAGGAAGAAGATTAA 1224 0.3954 MKRTVENEVVIVGGGICGLATALALHRKRIRSLVLEKSEKLRATGAAIIVQANGWHALDQLGIGSTLRQTAIAIQRGMFTSLSEKEPKELAFGINQEFRCLKRTDLIKAIANCLPMETIRTGCEVLSIELDPVTRYPHLMLSNGTILQAKVVIGCDGVNSTIANMVGLHQTKLLRFSTCVARGFTKYPNGHQFASEFALISRGQIQLGRIPVTHNLVYWFLTRPTTSQDSIISKDLPLIRQSLVESMEGFPILTIDMIRSCKLNSLHLTYDLKYRPPWDLLLNNFKKGTIVVAGDAMHATGPFIAQGGSASIEDAIVLARCLAQKMHNSTKVIIDHNVIEEAFDKYVKERKMRIFWLSLHTFLVGKKLDTKSLMVRAVFLAIMFVLFRDPDCHSRYNCGTLHHEEED 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02998 407 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 2 402 IPR044560 -
Car06g02998 407 Gene3D - 7 373 IPR036188 -
Car06g02998 407 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 - -
Car06g02998 407 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 - -
Car06g02998 407 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 - -
Car06g02998 407 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 318 - -
Car06g02998 407 Pfam FAD binding domain 281 327 IPR002938 GO:0071949
Car06g02998 407 Pfam FAD binding domain 8 170 IPR002938 GO:0071949
Car06g02998 407 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 2 402 - -
Car06g02998 407 SUPERFAMILY FAD/NAD(P)-binding domain 8 388 IPR036188 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02998 1 404 Miscellaneous Gene Families AT5G05320 35.817 5.81e-75 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02998 - - cam:101505253 801.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02998 06 51236093 51239476 Car06g02998 06 51236093 51239476 ECH