Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02974 ATGGCTGAAGAACCCCAAAAACCAGCTGAACAAGTGGTTACAACCACTTCTGAAACTGCCGTTGAAAAGCCACCACAGGCTGAAGAAGTTGTAGCCGCCGCCTctgctgccgctgttcctcctgctgctgcAGAAGAGGCAGAAAATCCGGCAGAGTCAAAAGAAGTAGTTCCGGAGGCGGAGAACGTTAAATCTGAcgccgccgccgctgacgaaaccgccgccgTTGATAACAAGATTTCTCAATCGGTTTCTTTCAAGGAAGAAACTAACGTAGTTTCCGAACTACCTGAACCTCAGAAAAAAGCACTCGATGAACTCAAACTGCTTATTCAAGAAGCACTTAGCAAACACGAGTTCGCCGTCCCTCCACCACCGCCGCCACCGAAGGCCGCTGAGGCAACTCCACAAGACGACAAAAAACCTCAAGAAGAAGAAAAGAAGGAAGAAGTAGCAGAAGAGAAAAAGGAAGAAGTTGAAGAAGAGAAAAAAAAGGAAGAAGTTGAAGAAGAGAAAAAAAAGGAAGAAGTGGTAGTTGAGAAAAAGGTTGAAGAAGAAGTTGAAAAGAAAGAAGAGAAACAAGGTTCAAGTTCTGAGGAACCTAAAACCGAAGCAAAACCTGAAACCGAGGCTGTAGAGAAGAAAGTGGATGTAACCGTTGTAGAGTTAGTCGAGAAAATAGCTACAAGTGCCGAAGAAGACGGAGCAAAAACGGTTGAAGCAATTCAAGAAAGCATAGTATCCGTTACAGTTACTAACGGTGACGGTGAACAACCTGCTGCTGACGTGGAACTTCCTCCTTCAACACCAGAAGAAGTTGAAATATGGGGAATTCCCTTACTCGCTGATGAAAGAAGCGACGTGATTCTTCTCAAATTCCTTCGAGCAAGGGATTTCAAGGTGAAAGAAGCCTTCACAATGATCAAACAAACCGTTATTTGGCGTAAGGAATTCGGAATCGAAGGGCTTCTTCAGGAAGATCTCGGAACCGATTGGGACAAAGTTGTTTTCACTGACGGCTATGACAAAGAAGGTCATCCTGTTTGTTATAACGTGTTTGGCGAGTTTGAGAATAAGGATTTGTATCAAAAAACTTTCTCTGACGAAGAGAAGCGAAACAAGTTTATTCGTTGGAGGATTCAGTTTTTGGAAAAGAGTGTTAGAAAACTCAACTTTGCTCCATCAGCTATATCTACTTTTGTTCAAGTTAATGATCTTAAAAATTCACCTGGACTTGGTAAGAGAGAGCTTAGACAAGCTACTAATCAAGCACTTCAGTTGCTTCAGGATAACTATCCTGAATTCGTAGCCAAACAGATTTTTATCAATGTTCCTTGGTGGTACCTTGCCTTTTCTAGGATGATAAGTGCTTTCCTGACACCGAGGACTAAGAGCAAATTTTTTTTTGCCGGTCCCTCCAAATCTGCTGATACCCTTTTCAAATACATAGCTCCTGAGCAAGTGCCGGTTCAATATGGTGGACTAAGCAGAGAGGGGGACCAGGAATTCACCACTGCTGACCCTGCTACAGAGGTTACCATCAAACCAGCAACTAAACATGCTGTTGAGTTCCCAATTCCTGAGAAAAGCACTTTGGTTTGGGAAGTCAGAGTTGTGGGTTGGGATGTAAGCTATGGAGCAGAATTTGTGCCTAGTGCTGAGGATGGATACACTGTTATAGTACAAAAGAACAGGAAAATTGCTCCAGCTGATGAAACAGTAATTAACAACACGTTCAAAATTGGTGAACCTGGTAAGGTTGTTCTCACCATAGATAACCAAACATCCAAGAAGAAGAAGCTCCTTTACAGGTCCAAGACCATACCCATCTCTGAGTAA 1839 0.4111 MAEEPQKPAEQVVTTTSETAVEKPPQAEEVVAAASAAAVPPAAAEEAENPAESKEVVPEAENVKSDAAAADETAAVDNKISQSVSFKEETNVVSELPEPQKKALDELKLLIQEALSKHEFAVPPPPPPPKAAEATPQDDKKPQEEEKKEEVAEEKKEEVEEEKKKEEVEEEKKKEEVVVEKKVEEEVEKKEEKQGSSSEEPKTEAKPETEAVEKKVDVTVVELVEKIATSAEEDGAKTVEAIQESIVSVTVTNGDGEQPAADVELPPSTPEEVEIWGIPLLADERSDVILLKFLRARDFKVKEAFTMIKQTVIWRKEFGIEGLLQEDLGTDWDKVVFTDGYDKEGHPVCYNVFGEFENKDLYQKTFSDEEKRNKFIRWRIQFLEKSVRKLNFAPSAISTFVQVNDLKNSPGLGKRELRQATNQALQLLQDNYPEFVAKQIFINVPWWYLAFSRMISAFLTPRTKSKFFFAGPSKSADTLFKYIAPEQVPVQYGGLSREGDQEFTTADPATEVTIKPATKHAVEFPIPEKSTLVWEVRVVGWDVSYGAEFVPSAEDGYTVIVQKNRKIAPADETVINNTFKIGEPGKVVLTIDNQTSKKKKLLYRSKTIPISE 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02974 612 Coils Coil 141 185 - -
Car06g02974 612 SUPERFAMILY CRAL/TRIO domain 336 496 IPR036865 -
Car06g02974 612 PANTHER PATELLIN-1 1 612 IPR044834 GO:0008289
Car06g02974 612 Pfam CRAL/TRIO, N-terminal domain 269 309 IPR011074 -
Car06g02974 612 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 325 500 IPR001251 -
Car06g02974 612 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 510 608 IPR036598 -
Car06g02974 612 SUPERFAMILY CRAL/TRIO N-terminal domain 84 327 IPR036273 -
Car06g02974 612 MobiDBLite consensus disorder prediction 115 212 - -
Car06g02974 612 Gene3D - 267 317 - -
Car06g02974 612 CDD SEC14 331 495 IPR001251 -
Car06g02974 612 Gene3D GOLD domain 512 608 - -
Car06g02974 612 Gene3D - 334 511 IPR036865 -
Car06g02974 612 PANTHER PATELLIN-LIKE PROTEIN 1 612 - -
Car06g02974 612 SMART CRAL_TRIO_N_2 286 311 IPR011074 -
Car06g02974 612 SMART sec14_4 329 497 IPR001251 -
Car06g02974 612 MobiDBLite consensus disorder prediction 134 212 - -
Car06g02974 612 MobiDBLite consensus disorder prediction 1 76 - -
Car06g02974 612 ProSiteProfiles GOLD domain profile. 501 607 IPR009038 -
Car06g02974 612 Pfam CRAL/TRIO domain 334 494 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02974 Car-Chr6 50355587 50359240 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02974 290 489 Acyl Lipid Metabolism Gene Families AT1G55840 29.954 2.32e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02974 - K19996 tcc:18593040 672.93