Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02972 ATGGCTGAAACCGAAGACGTATTGTTAGAAGATGAATTGGCTGTCGTTGATGGCGTTGTTGACTACAAAGGTCAACCTGTCATCAGATCCAAATCTGGTTATTGGAGATCCGCTTGGTATATAATTGGTGTGGAGGTGGCAGAGAGGGTATCGTATTATGGAATACAGGGGAACTTGATATCGTATCTAACGGGGCCACTAAATCAGAGCACTGCAACAGCCGCTGAGAATGTTAATATCTGGGCTGGAACTGCTTCACTTCTTCCTCTCTTTGGTGCTTTTGTTGCTGATTCTCTTCTTGGACGCTACCATACAATCATACTTGCTTCTCTCATCTATATCTTGGGACTAGGATTGTTAACATTATCAGCTATGCTTCCTTCCCTCACCAAATCAAAATGCCAAGTTGACAGTAAATTCATATTCTGCTCATCTCAGTCACAAGTAGTCTTATTCTTCATTTCACTTTATCTAGTTGCCATTGGACAAGGTGGACATAAACCTTGTGTTCAAGCTTTCGGCGCGGATCAATTCGACGAACAACATCCTAAGGAGCTCAAAGCTAGAAGCTCATTCTTTAATTGGTGGTATTTTACAATGGTTGCAGGTTGCACCGTGACGCTTGCGGTCTTGAACTATATACAAGATAACTATAGTTGGGTTCTTGGATTTGGAATCCCTTGTGTTGTTATGATCAGTGCCTTGCTTGTTTTCTTGCTTGGAACAATGACTTATAGGTTTAACACTCAGAAACAGGACAAGAGTCCCTTTCGTAGAATCGGTCGTGTATTCGTTGCAGCTGTAAGAAGTTGGCGAACTGAGTTATCAAGCACAGATATTGAAGAGGAATGTGATGGGATTCTTTGTCGTCGAAGTTCTGAACAATTCAAATTCCTCAACAAGGCATTGCTAACACCAAAGGGAGCCAAAGAAGATGAGACATGTAGCCTTAGTGATGTGGAAGAAGCAAAGGCAATTCTAAGGCTTGTTCCAATTTGGGCTACAACTCTTGTTTATGGTATTGTGTTTGCTCAAGTTTTTACATTCTTCACCAAACAAGGGAGTTCTATGGAGAGAACCATTTTTCCTGGCATTGACATACCACCTGCTTCTCTTCAATCGATTAATGGTGTCGCCATTGTTCTCTTCAGCCCTATCTACGACCGCGTATTCGTGCCAGCCGCAAGAGCTATCACTGGTAAACCCTCTGGCATCACAATGCTTCAAAGAATTGGCATTGGAATTTTTATATCCATATTTACAGTAGTAAGTGCAGCTTTTATTGAGATTAAAAGACTAAAAACAGCACAAGAGTATGGTCTGGTTGATGATCCTAATGCAACTGTTCCGATGAGTATATGGTGGTTGATTCCTCAGTACTTTTTGTTTGGATTTTCTGAGGTTTTTACTATGGTTGGTCTTCAAGAATTTTTCTATGATCAAGTCCCAAATGAACTAAGAAGCATGGGACTTGCACTCTACTTAAGTATTGTTGGTGTTGGAAGCTTTCTAAGTGGATTTCTCATTTCTATGATAGAAAATATTACTGGAAAAGATGGACATGAAAGTTGGTTTTGTGATAATATCAATAAGGCACGTCTTGATTACTTTTACTGGCTACTTGCTGGATTCAGTATGGTGTCATTTACTTTCTTCATTTACTTTGCAAAATCTTACGTTTATAATCACAAAAGTGTCACTACCCAAGGATAG 1713 0.4005 MAETEDVLLEDELAVVDGVVDYKGQPVIRSKSGYWRSAWYIIGVEVAERVSYYGIQGNLISYLTGPLNQSTATAAENVNIWAGTASLLPLFGAFVADSLLGRYHTIILASLIYILGLGLLTLSAMLPSLTKSKCQVDSKFIFCSSQSQVVLFFISLYLVAIGQGGHKPCVQAFGADQFDEQHPKELKARSSFFNWWYFTMVAGCTVTLAVLNYIQDNYSWVLGFGIPCVVMISALLVFLLGTMTYRFNTQKQDKSPFRRIGRVFVAAVRSWRTELSSTDIEEECDGILCRRSSEQFKFLNKALLTPKGAKEDETCSLSDVEEAKAILRLVPIWATTLVYGIVFAQVFTFFTKQGSSMERTIFPGIDIPPASLQSINGVAIVLFSPIYDRVFVPAARAITGKPSGITMLQRIGIGIFISIFTVVSAAFIEIKRLKTAQEYGLVDDPNATVPMSIWWLIPQYFLFGFSEVFTMVGLQEFFYDQVPNELRSMGLALYLSIVGVGSFLSGFLISMIENITGKDGHESWFCDNINKARLDYFYWLLAGFSMVSFTFFIYFAKSYVYNHKSVTTQG 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02972 570 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 19 565 IPR000109 GO:0016020|GO:0022857|GO:0055085
Car06g02972 570 Gene3D MFS general substrate transporter like domains 8 568 IPR036259 -
Car06g02972 570 Pfam POT family 103 524 IPR000109 GO:0016020|GO:0022857|GO:0055085
Car06g02972 570 CDD MFS_NPF5 35 561 IPR044739 GO:0042937|GO:0042938|GO:0071916
Car06g02972 570 PANTHER PEPTIDE/NITRATE TRANSPORTER PLANT-LIKE PROTEIN 19 565 - -
Car06g02972 570 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 92 116 IPR018456 GO:0006857|GO:0016020|GO:0022857
Car06g02972 570 SUPERFAMILY MFS general substrate transporter 29 557 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02972 Car-Chr6 50282438 50292572 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02972 20 560 Organic Solute Cotransporters AT1G22540 63.216 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02972 K14638 - gmx:100776720 832.017