Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02966 ATGGAGGACATTGAAGATTTGCTGATCGGAACCGAAACTGGTACACCACCGGGATTTCGTTCTCCGTTAACGTCCGCTACAGTTGGCGTTGGAACGAAGAAAAATCAACGCTccttaccttcaccttcaccttcaccttcaATCCCTGGCACTCAGACTATTTTCATAAAGACCTTTGGGTGCTCTCATAACCAGAGTGATAGTGAATATATGGCTGGTCAGCTTTCAGCTTTTGGTTATTCATTGAGTGATAATCCTGACGAAGCAGATCTATGGCTCATAAACACTTGCACAGTAAAATCCCCGAGTCAATCTGCAATGGATACCATTATAACAAAAGGAAAATCATCAAATAAACCACTAGTTGTTGCTGGCTGTGTTCCCCAAGGAAGTCGAGATGCTAAAGAACTGGAAGGGATCAGCATTGTAGGAGTCCAGCAAATTGATCGTGTCGTTGAAGTTGTAGAAGAGACTTTAAAAGGTCACGAAGTCCGGCTTTTGACCCGTAAGAGATTGCCAGCACTTGACCTTCCAAAGGTGAGAAAGAACAAATTTGTTGAGATTCTTCCAATTAATGTTGGTTGTTTAGGTGCTTGTACTTATTGCAAGACAAAGCATGCTCGGGGTCACTTAGGGAGTTACACAATAGATAGCCTTGCTGGACGTGTAAAATCTGTGATATCTGATGGAGTTAAAGAGATATGGCTGAGCAGTGAAGATACTGGAGCATATGGGCGTGACATTGGTGTCAATCTTCCAACTTTATTGAATGCCTTAGTAGCAGAATTACCAGCAGATGCAAGCACTATGCTGCGTATTGGAATGACCAATCCACCTTTTATCCTTGAACACTTGAAAGAGATAGCAGAAGTTCTACGACATCCATGTGTTTACTCCTTTTTGCACGTGCCAGTTCAGTCTGGAAGTGATGCTATTTTGAGTGCAATGAACCGAGAATATACTGTAAGGGAGTTCAGGACTGTTGTAGATACCTTAACTGAGCTTGTGCCAGAGATGCAGATTGCCACTGATATAATATGTGGATTTCCAGGTGAAACCGATGAAGATTTTGAGCAAACTGTCAACCTTATAAAAGAATACAAGTTTTCTCAAGTTCATATTTCACAATTTTATCCTCGGCCAGGCACACCTGCGGCAAGGATGAAAAAGGTTCCAAGTAATGTGGTGAAGAGAAGAAGCCGTGAACTAACAAATGTCTTTGAAGCGTTCACGCCATACAATGGGATGGAAGGCAGAGTGGAAAGAATTTGGATTACTGATATAGCATCTGATGGAGTACACTTGGTTGGTCATACAAAGGGATATATACAAGTTCTCGTGATTGCTTCAGATGATATGCTTGGAACTTCAGCTATGGTTAAGATAACATCTGTGGGAAGGTGGTCGGTTTTTGGAGAAATAATTGAGACAATCAAAGAAGCAAAGGACAATAAAGCTTTGAACACGCAGATTCCTAATCAAGATATGTCTTTACTATGCTGTAACCAAACCAAAACTGGTGTAATCTCAGAAGAGCCAGAATCTTGTGCTTGTGGAAATGACATTGACAGCTGCTGCAGTCAGAGTACTCTCGAGAAGATTGATAATTCAAGCGGCACTGTAATGCAACAGAATCAAAACAACAAAAATTTGTTTGGATGGATATTGAGGAAGCGGAAGAATCTTCACAAAAGGGTAGAAAGTGAACATTCCTCAGGATCTGATATAAAGCAAGAAAGAAGCATGAAAAAGTGGGACTTTGTTGATAAGGCTCTTTTGGGTGGAATATCTATCAGCATTTTGACAATTGTTGTTCTATTAGTTTGTCTTAGTTTTAGTGTTATTTGGTCCCAGTAA 1857 0.4006 MEDIEDLLIGTETGTPPGFRSPLTSATVGVGTKKNQRSLPSPSPSPSIPGTQTIFIKTFGCSHNQSDSEYMAGQLSAFGYSLSDNPDEADLWLINTCTVKSPSQSAMDTIITKGKSSNKPLVVAGCVPQGSRDAKELEGISIVGVQQIDRVVEVVEETLKGHEVRLLTRKRLPALDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLAGRVKSVISDGVKEIWLSSEDTGAYGRDIGVNLPTLLNALVAELPADASTMLRIGMTNPPFILEHLKEIAEVLRHPCVYSFLHVPVQSGSDAILSAMNREYTVREFRTVVDTLTELVPEMQIATDIICGFPGETDEDFEQTVNLIKEYKFSQVHISQFYPRPGTPAARMKKVPSNVVKRRSRELTNVFEAFTPYNGMEGRVERIWITDIASDGVHLVGHTKGYIQVLVIASDDMLGTSAMVKITSVGRWSVFGEIIETIKEAKDNKALNTQIPNQDMSLLCCNQTKTGVISEEPESCACGNDIDSCCSQSTLEKIDNSSGTVMQQNQNNKNLFGWILRKRKNLHKRVESEHSSGSDIKQERSMKKWDFVDKALLGGISISILTIVVLLVCLSFSVIWSQ 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02966 618 CDD Radical_SAM 189 393 - -
Car06g02966 618 MobiDBLite consensus disorder prediction 17 41 - -
Car06g02966 618 TIGRFAM MiaB-like-B: MiaB-like tRNA modifying enzyme, archaeal-type 54 475 IPR006466 GO:0035598|GO:0035600
Car06g02966 618 Gene3D - 53 173 IPR038135 -
Car06g02966 618 SFLD Radical SAM 133 399 IPR007197 GO:0003824|GO:0051536
Car06g02966 618 ProSiteProfiles Methylthiotransferase N-terminal domain profile. 52 160 IPR013848 GO:0035596|GO:0051539
Car06g02966 618 TIGRFAM TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 53 470 IPR005839 GO:0006400|GO:0016740|GO:0051539
Car06g02966 618 SUPERFAMILY Radical SAM enzymes 174 409 - -
Car06g02966 618 ProSiteProfiles Radical SAM core domain profile. 181 414 IPR007197 GO:0003824|GO:0051536
Car06g02966 618 SMART MiaB 185 409 IPR006638 GO:0003824|GO:0051536
Car06g02966 618 Pfam Uncharacterized protein family UPF0004 54 132 IPR013848 GO:0035596|GO:0051539
Car06g02966 618 Pfam Radical SAM superfamily 192 364 IPR007197 GO:0003824|GO:0051536
Car06g02966 618 ProSitePatterns Methylthiotransferase radical SAM domain signature. 189 209 IPR020612 GO:0051539
Car06g02966 618 Gene3D tm_1862 like domain 183 414 IPR023404 -
Car06g02966 618 SFLD B12-binding domain containing 133 399 - -
Car06g02966 618 MobiDBLite consensus disorder prediction 1 49 - -
Car06g02966 618 PANTHER RADICAL SAM PROTEINS 1 508 - -
Car06g02966 618 ProSiteProfiles TRAM domain profile. 414 476 IPR002792 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02966 K15865 - gmx:100798865 1025.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02966 06 49997244 50009085 Car06g02966 06 49997244 50009085 ECH