Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02929 ATGGAGGAGCATGTAGCAGCTTTGCACACTGCTACTAACGCTTTGCAAGCATTAGGAAGGGGTTTTGATATTAACTTCGATACTAGGTTGCTTTATTGTAAAGGTGTTTCAGGGTCTAGAGTAGTTGAGATTGATGAGGAACATCTTATGGACTTGTTTTTGGATGATGATGTTGTTGTTCCTAATGTTTCAAGGGATATTAGAAGCTTTCATGAACCTATGGGGCGTCAGAGTTCGGGTGTCTACAGTTTTCAAGAGATGGTGGATTATTTTAATCATAAGGCAAATATATCAGGGAAATTTCCTCTTGGGAGCTTCAACTCTGCATTTAGCTTTACTGGTTCACAACATGTAGATGCGGCAACTACAAAAACCTTATCTTCAGATGGATTTTACATTCCTCTTGCAAAGGTTCAGCTTCAAAAATCGAACTTAATGTTGCAAGAAAATGTTAGAAGGGCTGTCCCAGTGAATTGGGATCCACCATCCCTGGCAAGTTTTATTGAAAATTTTGGGACACATGTTATTACATCGGTAACTATTGGTGGAAAAGATGTTATTTATATCAAACAACACCATACTTCACCTTTGTCAAAGTTGGAGATAAAAAACTATATTCAGGATATCGGAAATCAAAGGTTCTCTGACATCAATAGCCACACAAGTTCAGGTCAAACAAAATCCAAGGATAAGGCTACATTTTCCTTCAATAGTCAAGGGATTTACCCTCAACCGACAACTGCAACATATCCTACTGGGAAAGAAGATGTCACAGTCATTTTTCGAAGAAGAGGAGGTGATGATTTAGAACAAAACCACCATGTATGGTTAAAAACCGTAAAATCTTCGCCAGATATCATAGAGATGACTTTCTGTCCAATAACAGATCTCCTTGATAAAATACCTGCAAAGGAGCATTTGACCCGCGCCATTGGTCTTTATCTTGAATATAAACCTCCAATTGAAGAACTTAGATACTTCCTAGAGTTTCAGATTCCTCGTGTTTGGGCTCCTTTACATGACAGGATTCTTGGTCAACAAAGGAAAGAACCTGTTTGCCCATCTTTGCAATTCAGCATAATGGGCCAAAAACTTTACGTCAGCCAAGAACAGATTACAGCTGGACGTAGACCAGTAACTGGCTTACGTCTTTGTCTCGAAGGAATCAAGCAGAATCGGCTAAGTGTTCATCTTCAACACTTGGTATCCCTTCCAAAGATCCTTCACCCATATTGGGACAGCCATGTAGCTATCGGCGCTCCCAAGTGGCAAGGACCCGAGGAACAAGATAGCCGATGGTTTGAGCCGGTCAAGTGGAAGAATTTTTCTCATGTGAGCACTGCACCTATCGAGAATCCTGAAACCTTCATAGGAGACTTCTCTGGTGTCTACATAGTCACTGGAGCACAGCTTGGAGTATGGGATTTTGGATCACGGAATGTACTTTACATGAAGCTTTTGTACTCAAGGTTACCCGGCTGCACGATCCGAAGATCACTATGGGATCACATACCAAACAATTTACCTAAATCTGCAATCGCTGGCAACACTTCCAACACGGATGGCGCAACGAGCGTCAGTTCTAGAGAAAACAATACTGCAGTGAACAAGTTATTGAAGCTTGTCGACTTATCCGAAATGACCAAAGGACCTGAAGATCCTCCTGGTCATTGGTTAGTTACTGGTGGAAAGCTCGGTGTTGAAAAAGGGAAAATCGTTTTGAGATTGAAATATTCATTGCTTAATTACTGA 1752 0.4098 MEEHVAALHTATNALQALGRGFDINFDTRLLYCKGVSGSRVVEIDEEHLMDLFLDDDVVVPNVSRDIRSFHEPMGRQSSGVYSFQEMVDYFNHKANISGKFPLGSFNSAFSFTGSQHVDAATTKTLSSDGFYIPLAKVQLQKSNLMLQENVRRAVPVNWDPPSLASFIENFGTHVITSVTIGGKDVIYIKQHHTSPLSKLEIKNYIQDIGNQRFSDINSHTSSGQTKSKDKATFSFNSQGIYPQPTTATYPTGKEDVTVIFRRRGGDDLEQNHHVWLKTVKSSPDIIEMTFCPITDLLDKIPAKEHLTRAIGLYLEYKPPIEELRYFLEFQIPRVWAPLHDRILGQQRKEPVCPSLQFSIMGQKLYVSQEQITAGRRPVTGLRLCLEGIKQNRLSVHLQHLVSLPKILHPYWDSHVAIGAPKWQGPEEQDSRWFEPVKWKNFSHVSTAPIENPETFIGDFSGVYIVTGAQLGVWDFGSRNVLYMKLLYSRLPGCTIRRSLWDHIPNNLPKSAIAGNTSNTDGATSVSSRENNTAVNKLLKLVDLSEMTKGPEDPPGHWLVTGGKLGVEKGKIVLRLKYSLLNY 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02929 583 Pfam MAC/Perforin domain 104 314 IPR020864 -
Car06g02929 583 SMART MACPF_8 123 316 IPR020864 -
Car06g02929 583 MobiDBLite consensus disorder prediction 511 530 - -
Car06g02929 583 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 328 IPR020864 -
Car06g02929 583 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 6 583 IPR044663 GO:0006952|GO:0012501|GO:2000031
Car06g02929 583 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1-LIKE 6 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02929 Car-Chr6 47996377 48002906 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02929 - - aprc:113849343 1042.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02929 06 47996377 48002906 Car06g02929 06 47996377 48002906 ECH